GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 23:46:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-40013 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w9g20 5', mRNA sequence.
DV695218.1:215-239
GGGAAGGGAGGGAATTGGCATTAATACAAG215TTATCAGAGAGCGTTCGTTTGTTGTGTTTTCTGAATTATGGGTGTTGTGCCGACG
CGN-44393 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w6g8 5', mRNA sequence.
DV698696.1:132-156
GGGAAGGGAGGGAATTGGCATTAATACAAG132TTATCAGAGAGCGTTCGTTTGTTGTGTTTTCTGAATTATGGGTGTTGTGTCGACG
CGN-49796 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w26e5 5', mRNA sequence.
DV703267.1:166-190
GGGAAGGGAGGGAATTGGCATTAATACAAG166TTATCAGAGAGCGTTCGTTTGTTGTGTTTTCTGAATTATGGGTGTTGTGTCGACG
CGN-49888 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w25m5 5', mRNA sequence.
DV703342.1:156-180
GGGAAGGGAGGGAATTGGCATTAATACAAG156TTATCAGAGAGCGTTCGTTTGTTGTGTTTTCTGAATTATGGGTGTTGTGTCGACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTATCAGAGAGCGTTCGTTTGTTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTATCAGAGAGCGTTCGTTTGTTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.243 | 0.234 | search_plus_done; http://172.18.8.135:50400/match?q=TTATCAGAGAGCGTTCGTTTGTTGT&k=0&no_gap=0&offset=0&limit=50
0.257 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=ACAACAAACGAACGCTCTCTGATAA&k=0&no_gap=0&offset=0&limit=46
0.257 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).