GGGenome | Results

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2025-04-10 23:19:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Elaeis guineensis microsatellite DNA, clone mEgCIR0304.
AJ271931.1:142-161

AAGTGTGTGTGTGTGTGCGCGTGTTCATCT142TTATGCTTTCGTGTATGCCAC

Plagiodera versicolora genome assembly, chromosome: 1.
OY757524.1:29482172-29482191

AAAACAGAAAAAAATCCTCAATTTGAGTTT29482172TTATGCTTTCGTGTATGCCAACCAAATTCAACGAAATACATGGATAATAG

Musa troglodytarum cultivar karat chromosome 1.
CP097502.1:61041783-61041802

GTTTCTATATGTGAAACTGTATATGATATT61041783TGGCATACACGAAAGCATAAGTAGAGTTAAAGAGTTAAAAATTAATCTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TTATGCTTTCGTGTATGCCA&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCATACACGAAAGCATAA&k=0&no_gap=0&offset=0&limit=48
0.134 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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