GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 22:10:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bufo bufo genome assembly, chromosome: 4.
LR991670.1:107849111-107849130
GGAAAAGCGAAAATCACTATATTTACAAAT107849111TTCACAGAATCAGCACCCTGTTTTTTTGTCTGCGGCAGAAACCGTTTATC
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:107849764-107849783
GGAAAAGCGAAAATCACTATATTTACAAAT107849764TTCACAGAATCAGCACCCTGTTTTTTGTCTGCGGCAGAAACCGTTTATCA
Trifolium repens mRNA, clone: WCC13i08_021, unspecified EST.
FY458685.1:43-62
CTTTATTATCATCATCCGGTTTCTAATTCA43TTCACAGAATCAGCACCCTGTTTTCATTCCCCACAAGTAACATAATACTA
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:10907208-10907227
TATCATATCATCATCCGGTTTCCAATTTCA10907208TTCACAGAATCAGCACCCTGTTTTCGTTTCCCACAAGTAACTAACACAAA
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:51812970-51812989
TAGTATTATGTTACTTGTGGGGAATGAAAA51812970CAGGGTGCTGATTCTGTGAATGAATTAGAAACCGGATGATGATAATAAAG
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:51205317-51205336
TAGTATTACGTTACTTGTGGGAAATGAAAA51205317CAGGGTGCTGATTCTGTGAATGAATTAGAAACCGGATGATGATAATAAAG
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:43776374-43776393
TAGTATTTTGTTACTTGTGGGAAATGAAAA43776374CAGGGTGCTGATTCTGTGAATGAATTGAAACCGGATGATGATGATGATAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTCACAGAATCAGCACCCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACAGAATCAGCACCCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACAGAATCAGCACCCTG&k=0&no_gap=0&offset=0&limit=50
0.217 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGGTGCTGATTCTGTGAA&k=0&no_gap=0&offset=0&limit=46
0.219 | 0.002 | cgi_end;

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