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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-21 23:45:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 6968 from Patent WO2009037279.
GN102187.1:669-690
AGGAAATTCTTGTTACTGGTATCAAGGTTG669TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAGATTGGGTTGTTTGGTGG
Sequence 6968 from patent US 8664475.
HK290186.1:669-690
AGGAAATTCTTGTTACTGGTATCAAGGTTG669TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAGATTGGGTTGTTTGGTGG
00440 MtRHE Medicago truncatula cDNA 5' similar to ATP synthase beta chain, mitochondrial, mRNA sequence.
AA660554.1:444-465
AACAGATCCTTGTTACTGGTATCAANGTTG444TTGACCTGCTTGCACCATACCAAAGGGGAAGGAAGATTGGGTTGTTTGGTGG
00538 MtRHE Medicago truncatula cDNA 5' similar to ATP synthase beta chain, mRNA sequence.
AA660650.1:351-372
AACAGATCCTTGTTACTGGTATCAAGGTTG351TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
00566 MtRHE Medicago truncatula cDNA 5' similar to ATP synthase beta chain, mRNA sequence.
AA660677.1:452-473
ACAGATCCTTGTTACTGGTATCAAGGTTGT452TTGACCTGCTTGCACCATACCAAANGGGAAGGAAAGATTGGGTTGTTTGGTG
T113063e KV2 Medicago truncatula cDNA clone pKV2-1C20, mRNA sequence.
AI974613.1:367-388
AACAGATCCTTGTTACTGGTATCAAGGTTG367TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAG
Medicago truncatula EST MtBA31A04F1 : T3 end of clone MtBA31A04 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL369422.1:330-351
AACAGATCCTTGTTACTGGTATCAAGGTTG330TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
Medicago truncatula EST MtBA36H04F1 : T3 end of clone MtBA36H04 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL370289.1:157-178
AACAGATCCTTGTTACTGGTATCAAGGTTG157TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
NF106F02ST1F1025 Developing stem Medicago truncatula cDNA clone NF106F02ST 5', mRNA sequence.
AW696473.2:289-310
AACAGATCCTTGTTACTGGTATCAAGGTTG289TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGG
EST398011 KV0 Medicago truncatula cDNA clone pKV0-21G10, mRNA sequence.
BE205335.1:325-346
AACAGATCCTTGTTACTGGTATCAAGGTTG325TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
NF119C01ST1F1004 Developing stem Medicago truncatula cDNA clone NF119C01ST 5', mRNA sequence.
BE325260.2:239-260
AACAGATCCTTGTTACTGGTATCAAGGTTG239TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST434371 DSLC Medicago truncatula cDNA clone pDSLC-38N20, mRNA sequence.
BF005873.1:56-77
AACAGATCCTTGTTACTGGTATCAAGGTTG56TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATGGGGTTGTTTGGTGG
EST484812 GVN Medicago truncatula cDNA clone pGVN-71F1 5' end, mRNA sequence.
BG583062.1:540-561
AACAGATCCTTGTTACTGGTATCAAGGTTG540TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST485794 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-14E8 5' end, mRNA sequence.
BG584034.1:665-686
AACAGATCCTTGTTACTGGTATCAAGGTTG665TTGACCTGCTTGCACCATACCAAAGGGGAGGGGAGATTGGGTTGTTTGGTGG
EST485811 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-14I8 5' end, mRNA sequence.
BG584051.1:669-690
AACAGATCCTTGTTACTGGTATCAAGGTTG669TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST486183 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-15F5 5' end, mRNA sequence.
BG584423.1:651-672
ACAGATCCTTGTTACTGGTATCAAGGGTTG651TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST487773 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-41M3 5' end, mRNA sequence.
BG586008.1:396-417
AACAGATCCTTGTTACTGGTATCAAGGTTG396TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST506547 KV3 Medicago truncatula cDNA clone pKV3-38B22 5' end, mRNA sequence.
BG644928.1:427-448
AACAGATCCTTGTTACTGGTATCAAGGTTG427TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST531100 GPOD Medicago truncatula cDNA clone pGPOD-13H10 5' end, mRNA sequence.
BI309690.1:661-682
AACAGATCCTTGTTACTGGTATCAAGGTTG661TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAAAAGATGGGTTGTTTGGT
EST531102 GPOD Medicago truncatula cDNA clone pGPOD-13H14 5' end, mRNA sequence.
BI309692.1:658-679
AACAGATCCTTGTTACTGGTATCAAGGTTG658TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTTGTTGGGTG
EST5314155 GESD Medicago truncatula cDNA clone pGESD17P12 5' end, mRNA sequence.
BI312405.1:263-284
AACAGATCCTTGTTACTGGTATCAAGGTTG263TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
MTNAC52TKM KVKC Medicago truncatula cDNA clone pKVKC-3E4, mRNA sequence.
BQ255212.1:374-395
AACAGATCCTTGTTACTGGTATCAAGGTTG374TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
EST642311 GPOD Medicago truncatula cDNA clone GPOD-38O12, mRNA sequence.
CA918164.1:672-693
AACAGATCCTTGTTACTGGTATCAAGGTTG672TTGACCTGCTTGCACCATACCAAAGGGAAGGAAGATTG
METB649TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY477763.1:143-164
AACAGATCCTTGTTACTGGTATCAAGGTTG143TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
Trifolium repens mRNA, clone: WCC12n20_024, unspecified EST.
FY458464.1:641-662
AAGAGATCCTTGTTACTGGTATCAAGGTTG641TTGACCTGCTTGCACCATACCAAAGG
Trifolium repens mRNA, clone: WCC17h14_028, unspecified EST.
FY460058.1:640-661
AAGAGATCCTTGTTACTGGTATCAAGGTTG640TTGACCTGCTTGCACCATACCAAAGGGGAGGAAAGATTGGATTGTTTGGCGG
TSA: Pisum sativum Ps_contig_mira-ass_129 mRNA sequence.
JI896984.1:706-727
AGGAAATTCTTGTTACTGGTATCAAGGTTG706TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAGATTGGGTTGTTTGGTGG
TSA: Pisum sativum contig00925.PisaPYK9 mRNA sequence.
JR951658.1:684-705
AGGAAATTCTTGTTACTGGTATCAAGGTTG684TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAGATTGGGTTGTTTGGTGG
Medicago truncatula clone mth2-176a24, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC225469.8:113824-113845
AATTTTGCTTGATTTTTTTCATATAGGTTG113824TTGACCTGCTTGCACCATACCAAAGGGGAGGGAAGATTGGGTTGTTTGGTGG
Pisum sativum F1 ATPase mRNA for F1 ATPase, complete cds.
AB003549.1:669-690
AGGAAATTCTTGTTACTGGTATCAAGGTTG669TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAGATTGGGTTGTTTGGTGG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-04.
CP023116.1:26806791-26806812
AATTTTCCATAAATTATGTCATACAGGTTG26806791TTGACCTGCTTGCACCATACCAAAGGGGAGGAAAGATTGGATTGTTCGGTGG
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:42473708-42473729
CCAATTTTGCATAAATTTTAATACAGGTTG42473708TTGACCTGCTTGCACCATACCAAAAGGGAGGAAAGATCAGGTTGTTTGGTGG
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:13242638-13242659
CCATTTTTGCATAAATTTTCATACATGTTG13242638TTGACCTGCTTGCACCATACCAAAGGGGAGGAAAGATCAGGTTGTTTGGTGG
Medicago lupulina genome assembly, chromosome: 3.
OY283141.1:3377401-3377422
AATTTTGCTTGATTTTTTTCATATAGGTTG3377401TTGACCTGCTTGCACCATACCAAAGGGGAGGAAAGATTGGGTTGTTTGGTGG
Lathyrus aphaca genome assembly, chromosome: 2.
OZ014520.1:28085425-28085446
AAATTTGTTTAAAATTTTCCTTGTAGGTTG28085425TTGACCTGCTTGCACCATACCAAAGAGGAGGAAAAATTGGGTTGTTTGGTGG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-20.
CP023132.1:3138746-3138767
CCACCAAACAATCCAATCTTTCCTCCCCTT3138746TGGTATGGTGCAAGCAGGTCAACAACCTGTATGGCAGAATTTAGGCAAAATT
Coriaria nepalensis isolate Cnep1 chromosome 13.
CP114473.1:7211137-7211158
CCACCAAACAGTCCGATCTTCCCACCTCTT7211137TGGTATGGTGCAAGCAGGTCAACAACCTATTTCACAAAGAGATAATGATATC
Coriaria nepalensis isolate Cnep1 chromosome 13.
CP114493.1:7350284-7350305
CCACCAAACAGTCCGATCTTCCCACCTCTT7350284TGGTATGGTGCAAGCAGGTCAACAACCTATTTCACAAAGAGATAATGATATC
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:62891456-62891477
CCACCAAACAACCCAATCTTTCCTCCCCTT62891456TGGTATGGTGCAAGCAGGTCAACAACCTGTATGAAAATTTATGCAAAAATGG
Medicago arabica genome assembly, chromosome: 2.
OX326965.1:63155581-63155602
CCACCAAACAACCCAATCTTTCCTCCCCTT63155581TGGTATGGTGCAAGCAGGTCAACAACCTATATGAAAAAAAATCAAGCAAAAT
Trifolium dubium genome assembly, chromosome: 3.
OX638064.1:56973883-56973904
CCACCAAACAACCCAATCTTTCCTCCTCTT56973883TGGTATGGTGCAAGCAGGTCAACAACCTATATCGAAAAAATTATGCAAAAAA
Trifolium dubium genome assembly, chromosome: 13.
OX638074.1:33803278-33803299
CCACCAAACAACCCAATCTTTCCTCCTTTT33803278TGGTATGGTGCAAGCAGGTCAACAACCTACGTGAGAAAAATTATGCAAAAAA
Astragalus glycyphyllos genome assembly, chromosome: 3.
OY754309.1:71678855-71678876
CCACCAAACAACCCAATCTTTCCTCCTCTT71678855TGGTATGGTGCAAGCAGGTCAACAACCTGTATGGGAAAAATATGCAATTTTG
Lathyrus sativus genome assembly, chromosome: 6.
OZ012740.1:650538217-650538238
CCACCAAACAACCCAATCTTTCCTCCTCTT650538217TGGTATGGTGCAAGCAGGTCAACAACCTACAAGGAAAATATTAACCAAATGT

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