GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 01:15:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

601502632F1 NIH_MGC_70 Homo sapiens cDNA clone IMAGE:3904734 5', mRNA sequence.
BE910648.1:589-608
TCTCTAGAGTGATTGAATTATTTGGAAACA589TTGCTAGCTGCTTTAACTTTTGCTATCAGGTGCTCGGTTAATGCTGGAGC
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:30914107-30914126
AATTATGCATTTAATCTGGAAAATTAGTAA30914107TTGCTAGCTGCTTTAACTTTATTTATGCAGTTAAATCGAGATGAAATGTT
Ypsolopha scabrella genome assembly, chromosome: 19.
OU342979.1:10201947-10201966
AAAATATTAAAATTTTGGATTTTGGAAATT10201947TTGCTAGCTGCTTTAACTTTTTTTTAAAGTAAAAAACGCATTTTTTTTTA
Citrus reticulata microsatellite DNA, clone Ci01C07.
AJ567394.1:305-324
AACATTTCATCTCGATTTAACTGCATAAAT305AAAGTTAAAGCAGCTAGCAATTACTAATTTTCCAGATTAAATGCATAATT
Hecatera dysodea genome assembly, chromosome: 18.
HG995304.1:14160116-14160135
ATCCAGATCTAGATAAGCTGGGTTCTAGCA14160116AAAGTTAAAGCAGCTAGCAACACAGTAAACAGTTGACGTTCTAATTCAGT
Polyommatus icarus genome assembly, chromosome: 7.
OW569327.1:9091947-9091966
TGAAGAAGTAACTGTAATTTAGCTGTAAAT9091947AAAGTTAAAGCAGCTAGCAAGTTAATTTTACATTACTTACACTAAATTGA
Tachinus rufipes genome assembly, chromosome: 4.
OZ010744.1:31761684-31761703
TTCAATCTAATCGTGGACAAAATAATCAAC31761684AAAGTTAAAGCAGCTAGCAAAGGATACAGATTGAAATAAAAAGAAACCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGCTAGCTGCTTTAACTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTAGCTGCTTTAACTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTAGCTGCTTTAACTTT&k=0&no_gap=0&offset=0&limit=50
0.139 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGTTAAAGCAGCTAGCAA&k=0&no_gap=0&offset=0&limit=47
0.142 | 0.003 | cgi_end;

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