GGGenome | Results

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2025-04-11 09:27:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:15082704-15082723

GTTTTTTCGATATCACAGATTTAGTAATTA15082704TTGGATCGTTTGTGAGTTTGTTTTTGTAGTCGTTTTGTGAATTTAGGTAG

Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:15640911-15640930

GTTTTTTCGATATCACAGATTTAGTAATTA15640911TTGGATCGTTTGTGAGTTTGTTTTTGTAGTCGTTTTGTGAATTTAGGTAG

Fagus sylvatica genome assembly, chromosome: 6.
OU015766.1:21508250-21508269

TGTCCAAAAAAAAAAAAAACTACTTAAATT21508250TTGGATCGTTTGTGAGTTTGAGTATATATGAGAGAGAGAGAGTATTTTGT

Juncus effusus genome assembly, chromosome: 4.
OX326977.1:4069437-4069456

GAAGGCGGGAAGAATGAAAATGGAATGAGT4069437TTGGATCGTTTGTGAGTTTGGTTTGGGATTGTCGCGCCGCGCTAAATTCT

1_Tdi_b3v08.
OA564667.1:9035-9054

ATCGCAACTAAAATAAAATTAAATAATATA9035TTGGATCGTTTGTGAGTTTGGTAAATTTCACTGCACGCTTTAAATCGAAG

1_Tps_b3v08.
OD003453.1:33319-33338

ATCGCAACTAAAATAAAATAAAATAATATA33319TTGGATCGTTTGTGAGTTTGGTAAATTTCACTGCACGCTTTAAATCGAAG

JP 2016533752-A/283288: OLIGONUCLEOTIDE PROBES AND USES THEREOF.
LV237890.1:5-24

TTAA5CAAACTCACAAACGATCCAATCCACA

Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:1030342-1030361

AAAATTAAATTCACAAAACGACTCCAAAAA1030342CAAACTCACAAACGATCCAATAATTACTAAATCTGTGATATCGAAAAAAA

Ischnura elegans genome assembly, chromosome: 3.
OV121102.1:36452427-36452446

TGATTATTAAATTATAATCACAATAATCAG36452427CAAACTCACAAACGATCCAAGAAAGATAAGCAACTGTCTTCAGTATTGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.128 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGATCGTTTGTGAGTTTG&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACTCACAAACGATCCAA&k=0&no_gap=0&offset=0&limit=44
0.242 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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