GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 22:08:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-SFB00072 SFB (Oil Palm Inflorescence) Elaeis guineensis cDNA clone pOP-SFB00072 5', mRNA sequence.
JK629486.1:510-533
GGCGAATGAACACGATCGCTAGTGCTATAG510TTGGTCATTGGAGGCTCCTTCCTTGGCGGCGGTGACTGCCTATGCACTAGGCTG
Elaeis guineensis EST, clone (6lib)_isotig09540.
LM612421.1:607-630
GGCGAATGAACACGATCGCTAGTGCTATAG607TTGGTCATTGGAGGCTCCTTCCTTGGCGGCGGTGACTGCCTATGCACTAGGCTG
TSA: Elaeis guineensis isotig13854.Elguifruit mRNA sequence.
JO101081.1:2545-2568
CAGCCTAGTGCATAGGCAGTCACCGCCGCC2545AAGGAAGGAGCCTCCAATGACCAACTATAGCACTAGCGATCGTGTTCATTCGCC
Elaeis guineensis dead-box ATP-dependent RNA helicase (DDX) mRNA, partial cds.
KC146065.1:688-711
CAGCCTAGTGCATAGGCAGTCACCGCCGCC688AAGGAAGGAGCCTCCAATGACCAACTATAGCACTAGCGATCGTGTTCATTCGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGGTCATTGGAGGCTCCTTCCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTCATTGGAGGCTCCTTCCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.285 | 0.276 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTCATTGGAGGCTCCTTCCTT&k=0&no_gap=0&offset=0&limit=50
0.321 | 0.036 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGAAGGAGCCTCCAATGACCAA&k=0&no_gap=0&offset=0&limit=48
0.322 | 0.001 | cgi_end;

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