GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:37:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nesoenas mayeri genome assembly, chromosome: 13.
OY720069.1:4785948-4785967
AATTTCTGTATCAAAGGAATTGTTGTTTCT4785948TTGGTTGTGGGGTTGTTCAGTTTTGGTTTTTTTTAGTCACAGTTTTATGT
Ailanthus altissima genome assembly, chromosome: 31.
OX327713.1:11804556-11804575
CGGAGAAGGTGAGCTGGGTTAACCGGGAAG11804556TTGGTTGTGGGGTTGTTCAGTTGGGGATGAGTAGAGACAATGGAAGTGGG
Hyppa rectilinea genome assembly, chromosome: 17.
OX637317.1:3248964-3248983
TCGAATAAACAATATAACAAAAACCAGGGT3248964TTGGTTGTGGGGTTGTTCAGTGTCGTATCATAATCGGCCTATAATATTGC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:42499840-42499859
CTGAACCAAAACCTAATCAAACTGCTAAAT42499840CTGAACAACCCCACAACCAATTTTGCCTTTAATGACTAAATAGCAACAAT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:41666102-41666121
CTGAACCAAAACCTAATCAAACTGCTAAAT41666102CTGAACAACCCCACAACCAATTTTGCCTTTAATGACTAAATAGCAACAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGGTTGTGGGGTTGTTCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTTGTGGGGTTGTTCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTTGTGGGGTTGTTCAG&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAACAACCCCACAACCAA&k=0&no_gap=0&offset=0&limit=47
0.114 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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