GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 11:02:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acipenser ruthenus genome assembly, chromosome: 1.
OV737682.1:115207528-115207547
CCTCTCCTGCCTCGATCTCACCAAGCGCCC115207528TTTCGGTGAGTTTGTGTGGAGCGAAATAACTGACCAAATCACCTTAATCC
Acipenser ruthenus genome assembly, chromosome: 1.
OV754670.1:115963577-115963596
CCTCTCCTGCCTCGATCTCACCAAGCGCCC115963577TTTCGGTGAGTTTGTGTGGAGCGAAATAACTGACCAAATCACCTTAATCC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:57354681-57354700
TTATTACTACTTGATGTGACCCGATATACT57354681TTTCGGTGAGTTTGTGTGGAATTGTTTTTCCATCATCAAGTTCTTGGCGC
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:66045713-66045732
TTTTTACTACTTGATGCGACCCGGTACACT66045713TTTCGGTGAGTTTGTGTGGAATCAATTTTCCCTCATCAGTGATCAATGGG
Eupsilia transversa genome assembly, chromosome: 2.
OU611874.1:3047900-3047919
TAACTCTTTGGTGTTTGAGTTTGAATTGAT3047900TTTCGGTGAGTTTGTGTGGAGTATCGTATTGGTTTTGTAAGTGAATTTGT
Anopheles maculipalpis genome assembly, chromosome: 3.
OX030896.1:29301727-29301746
CTATCTTCTTCACTATCTATTTATCTGCGA29301727TTTCGGTGAGTTTGTGTGGATGTGTTTTCCAGCTTTTCGCGAATCATCGT
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:75849428-75849447
TTCTATAGATTATGCTGAGGGTAAAACGAT75849428TCCACACAAACTCACCGAAAAGTGTACTAGGTCGCATCAAGTAGTAATAA
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:94100960-94100979
CCAAAACAGTAATGGCTTAGCCCAAAAACT94100960TCCACACAAACTCACCGAAAAGTGAACCAGTTGCTAAAAAATGAAAATCA
Dryomyza anilis genome assembly, chromosome: 1.
OX638130.1:126522860-126522879
AAATTTTGCTATTTCTTCTGTCCAAAACTC126522860TCCACACAAACTCACCGAAATAATACTCAACACACAGAATTAATAACAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTCGGTGAGTTTGTGTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCGGTGAGTTTGTGTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCGGTGAGTTTGTGTGGA&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=TCCACACAAACTCACCGAAA&k=0&no_gap=0&offset=0&limit=44
0.144 | 0.002 | cgi_end;

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