GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:34:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Asterias rubens genome assembly, chromosome: 11.
LR699102.1:14933882-14933901
AGGAGCAACAGGCAGGACGATTTGGGGCAG14933882TTTGAAGAGCAACAGGCAGAGCGGTTTTTGGCAGTTAGAGTAGCAACTGG
Epinephelus fuscoguttatus DNA, LG24, complete sequence.
AP022698.1:21707985-21708004
ACTTTGCGCAATCAGTCCTCTCTCTCTTTC21707985TCTGCCTGTTGCTCTTCAAAGCTTGTGAGCTGTAAAAGATATTGAATTGA
Anabas testudineus genome assembly, chromosome: 4.
LR132043.1:20184708-20184727
TCAACAATTTTCAAACGACGTGTTCTTGCA20184708TCTGCCTGTTGCTCTTCAAATATACACACGGCCTTTTGTGTGCAGTATTT
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 2.
AP019867.1:8720842-8720861
TCGCTCTTACAAGTGATAAAACTAGAGGTT8720842TCTGCCTGTTGCTCTTCAAAGACTTGTTGAGTTGCAATAGGAAAAGAGAG
Cicer arietinum chromosome Ca4.
CP039334.1:8437296-8437315
ACCCTCAGCTATTTACACTGGTTTTCTTTT8437296TCTGCCTGTTGCTCTTCAAACCCCATTCTCTTTGAATTTTCAATTTTGTA
Cicer arietinum chromosome Ca4.
CP040769.1:8437296-8437315
ACCCTCAGCTATTTACACTGGTTTTCTTTT8437296TCTGCCTGTTGCTCTTCAAACCCCATTCTCTTTGAATTTTCAATTTTGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGAAGAGCAACAGGCAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGAAGAGCAACAGGCAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGAAGAGCAACAGGCAGA&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGCCTGTTGCTCTTCAAA&k=0&no_gap=0&offset=0&limit=49
0.118 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).