GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:48:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RCG01148.
DE246774.1:178-197
TGTCGTCGATGATGATGATGATAATGATGA178TTTTCCTTCTCCGAAACGAGTTAAACGAACTGACTC
[Clostridium] symbiosum CE91-St65 DNA, complete genome.
AP025571.1:4512412-4512431
GCCGGAGCTACAAAAATATCATCGTTGCCT4512412TTTTCCTTCTCCGAAACGAGAAACGGACTGTGATCGCTGCCGATAAAATC
[Clostridium] symbiosum CE91-St66 DNA, complete genome.
AP025572.1:4512520-4512539
GCCGGAGCTACAAAAATATCATCGTTGCCT4512520TTTTCCTTCTCCGAAACGAGAAACGGACTGTGATCGCTGCCGATAAAATC
Bacteroides vulgatus strain mpk genome.
CP013020.1:312841-312860
CAACTGCAACACACGGTCATTGAGCCACAC312841TTTTCCTTCTCCGAAACGAGTCTTGCGGAAACCTGTCCTAGTAACAACTT
Amphiduros pacificus genome assembly, chromosome: 4.
OX439003.1:3151415-3151434
GACCGATTTTGAACAGAGAATGCATGAATG3151415TTTTCCTTCTCCGAAACGAGTTGCATGGTCATTGGTCGCCCATCAAACCA
Sepiola atlantica genome assembly, chromosome: 33.
OY744547.1:44064417-44064436
ACAACAAGCATCATGGTTTTTAATTCAAAG44064417TTTTCCTTCTCCGAAACGAGTTACCCATCCCAAGGCTCTAGAGAATCGTG
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:10868815-10868834
GAGTTGACTCAGTAGAGTCACTTCGTTTAA10868815CTCGTTTCGGAGAAGGAAAATGATTATCATTATCATCATCTTGTGAGACA
Phocaeicola vulgatus strain BFG-191 chromosome, complete genome.
CP081912.1:76255-76274
AAGTTGTTACTAGGACAGGTTTCCGCAAGA76255CTCGTTTCGGAGAAGGAAAAGTGTGGCTCAATGACCGTGTGTTGCAGTTG
Thymelicus acteon genome assembly, chromosome: 25.
OX638237.1:4412631-4412650
ACGTAGATACATATTAAAAGTTAATTATCA4412631CTCGTTTCGGAGAAGGAAAACATCTTAAGTAAACTTAAGAAACTTTCCGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTCCTTCTCCGAAACGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCCTTCTCCGAAACGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.131 | 0.122 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCCTTCTCCGAAACGAG&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGTTTCGGAGAAGGAAAA&k=0&no_gap=0&offset=0&limit=44
0.165 | 0.002 | cgi_end;

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