GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 05:46:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Pyrus pyrifolia mRNA, contig: contig_41662.
FX407539.1:416-437
AGATGTGGTGATTCAACCAAGGACTACGAA416TTTTCTGCTACAGCCTATGGAGATGGAACCCCTTTTGGATATTTTGATGAAT
TSA: Pyrus pyrifolia mRNA, contig: contig_30281.
FX428745.1:102-123
CTTCCCTTTGATTCAACCAAGGACTACGAA102TTTTCTGCTACAGCCTATGGAGATGGAACCCCTTTTGGATATTTTGATGAAT
TSA: Pyrus x bretschneideri Unigene31826_XinShao mRNA sequence.
JR624700.1:57-78
ATTCATCAAAATATCCAAAAGGGGTTCCAT57CTCCATAGGCTGTAGCAGAAAATTCGTAGTCCTTGGTTGAATCAAAGGGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTCTGCTACAGCCTATGGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCTGCTACAGCCTATGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCTGCTACAGCCTATGGAG&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCATAGGCTGTAGCAGAAAA&k=0&no_gap=0&offset=0&limit=48
0.125 | 0.001 | cgi_end;

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