GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-07 11:57:28, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Raphanus sativus DNA, microsatellite locus RsSR104, cultivar: rat-tail radish.
AB608589.1:335-359
GAGAGAGAGAGAGAGAGAGAGAGAGCTGCG335TTTTGAATTTTCCACTCTCTCACTCCCCACCACCACTACCTCTGTAAATTAAATT
Raphanus sativus genome assembly, chromosome: 3.
LR778312.1:39217520-39217544
AGTCAGGAGAGAGAGAGAGAGAGAGCTGCG39217520TTTTGAATTTTCCACTCTCTCACTCCCCACCACCACCACCTCTGTAAATTAAATT
Raphanus sativus genome assembly, chromosome: 9.
OY743206.1:39217520-39217544
AGTCAGGAGAGAGAGAGAGAGAGAGCTGCG39217520TTTTGAATTTTCCACTCTCTCACTCCCCACCACCACCACCTCTGTAAATTAAATT
Brassica nigra genome assembly, chromosome: 7.
OZ173177.1:13585014-13585038
AGAAGAGTCAGGAGAAGAGAGAGAACTGCG13585014TTTTGAATTTTCCACTCTCTCACTCCCCCCACCACCTCTGTAAAATAAATTAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTGAATTTTCCACTCTCTCACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTGAATTTTCCACTCTCTCACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.389 | search_plus_done; http://172.18.8.135:50800/match?q=TTTTGAATTTTCCACTCTCTCACTC&k=0&no_gap=0&offset=0&limit=50
0.516 | 0.118 | search_minus_done; http://172.18.8.135:50800/match?q=GAGTGAGAGAGTGGAAAATTCAAAA&k=0&no_gap=0&offset=0&limit=46
0.516 | 0.000 | cgi_end;

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