GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 09:28:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

ICPM1C02 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1C02 5', genomic survey sequence.
FI131371.1:299-318
AGTTTATTCTCACTCTATGTGGTTGTATGT299TTTTGTTTGGGTTGAACGCTACTTGCAATATTAGATCAAGTGATTCTGCT
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:222097695-222097714
CAGTCCCTTCGTTGGAAGAAATTCAAGATG222097695TTTTGTTTGGGTTGAACGCTGATGGGGCGGTCGGTCCGGATGGTTTCAAT
Sambucus nigra genome assembly, chromosome: 10.
OX422216.1:624592540-624592559
CAGTCCCTTCGTTGGAAGAAATTCAGGATG624592540TTTTGTTTGGGTTGAACGCTGACGGGGCGGCCGGTCCGGATGGTTTTAAT
Nephrotoma guestfalica genome assembly, chromosome: 2.
OY829914.1:284645474-284645493
AGGGCCTGATTACTTGGAGCCTTTTTAACA284645474TTTTGTTTGGGTTGAACGCTTTTGACAAAATTTAGTGGGGCAGAGGCTTC
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:14698912-14698931
TTACACAATTTTTTCAGATTCAAACCACAC14698912AGCGTTCAACCCAAACAAAATGGTTTCATTCCAAATGAATCCTACCTTTT
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:531864876-531864895
ATTAAAACCATCCAAACTAGTTGCCCCGTC531864876AGCGTTCAACCCAAACAAAACATCCTGAATTTCTTCCAATGAAGGGACTG
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:467650511-467650530
ATTAAAACCATTCGGACCGGCCGCCCCGTC467650511AGCGTTCAACCCAAACAAAACATCCTGAATTTCTTCCAATGAAGGGACTG
Sambucus nigra genome assembly, chromosome: 17.
OX422223.1:346927096-346927115
ATTAAAACCATCCGGATCGACCGCCCGGTC346927096AGCGTTCAACCCAAACAAAACAAAATGAATTTCTTCCAACGAAGGGACTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTGTTTGGGTTGAACGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTGTTTGGGTTGAACGCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.124 | 0.116 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTGTTTGGGTTGAACGCT&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AGCGTTCAACCCAAACAAAA&k=0&no_gap=0&offset=0&limit=46
0.145 | 0.003 | cgi_end;

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