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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:38:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum chinense mRNA for putative phosphate-induced protein, complete cds.
AB372271.1:868-891
AGGTTTTTACTCCCTGCTATGTGGGACCCA868ACTAAATCTGCATGTTCGACACTCGTTTGA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:160966145-160966168
AGGTTTTTACTCCCTGCTATGTGGGACCCA160966145ACTAAATCTGCATGTTCGACACTCGTTTGATAGAGGGGAACAATCAGAAGGAGA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:139160416-139160439
AGGTTTATGCTCCCTGCTATGTGGGACCCA139160416ACTAAATCTGCATGTTCGACACTCGTTTGATTGTGGGGAACAATCAAAAGGTGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:173709049-173709072
AGGTTTTTACTCCCTGCTATGTGGGACCCA173709049ACTAAATCTGCATGTTCGACACTCGTTTGATAGAGGGGAACAATCAGAAGGAGA
KS21019F06 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100925.1:196-219
TCTCCTTCTGATTGTTCCCCTCTATCAAAC196GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS21029A04 KS21 Capsicum annuum cDNA, mRNA sequence.
GD101822.1:196-219
TCTCCTTCTGATTGTTCCCCTCTATCAAAC196GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS21059N02 KS21 Capsicum annuum cDNA, mRNA sequence.
GD104489.1:208-231
TCTCCTTCTGATTGTTCCCCTCTATCAAAC208GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS21062I16 KS21 Capsicum annuum cDNA, mRNA sequence.
GD104742.1:236-259
TCTCCTTCTGATTGTTCCCCTCTATCAAAC236GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS25001H06 KS25 Capsicum annuum cDNA, mRNA sequence.
GD123932.1:208-231
TCTCCTTCTGATTGTTCCCCTCTATCAAAC208GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS25022G16 KS25 Capsicum annuum cDNA, mRNA sequence.
GD125819.1:216-239
TCTCCTTCTGATTGTTCCCCTCTATCAAAC216GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS25040P14 KS25 Capsicum annuum cDNA, mRNA sequence.
GD127446.1:227-250
TCTCCTTCTGATTGTTCCCCTCTATCAAAC227GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS25053H08 KS25 Capsicum annuum cDNA, mRNA sequence.
GD128626.1:208-231
TCTCCTTCTGATTGTTCCCCTCTATCAAAC208GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
KS25055E20 KS25 Capsicum annuum cDNA, mRNA sequence.
GD128811.1:216-239
TCTCCTTCTGATTGTTCCCCTCTATCAAAC216GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
TSA: Capsicum annuum MGMT_Contig33747 mRNA sequence.
JW083991.1:532-555
TCTCCTTCTGATTGTTCCCCTCTATCAAAC532GAGTGTCGAACATGCAGATTTAGTTGGGTCCCACATAGCAGGGAGTAAAAACCT
Solanum dulcamara genome assembly, chromosome: 4.
OX359255.1:5876885-5876908
TATCTCCCTCTTATTTGTTCCTTCTCAAAC5876885GAGTGTCGAACATGCAGATTTAGTAGGGTCCCACATAGCAGGGAGTAAGAACCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/actaaatctgcatgttcgacactc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : actaaatctgcatgttcgacactc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=ACTAAATCTGCATGTTCGACACTC&k=0&no_gap=0&offset=0&limit=50
1.238 | 1.142 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTGTCGAACATGCAGATTTAGT&k=0&no_gap=0&offset=0&limit=46
1.246 | 0.008 | cgi_end;

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