GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-15 10:13:51, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A08.
HG996472.1:13317395-13317414
ATAAACGCCCTCGAGCGGAGGGAAGAAGGC13317395AGTCGAAATCCCGAACAATCGCCACCGCGATCTCTAACTTAATCGCCGGA
Barypeithes pellucidus genome assembly, chromosome: 8.
OZ022563.1:47507197-47507216
AATAAAAATACCGGGCCTATGTTTGTTTCA47507197AGTCGAAATCCCGAACAATCCCGAAAAACTTGTTACCTCTGCCTATCCAA
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:25290833-25290852
TCACAGGTAAATACCTATCTATGTATCTCC25290833GATTGTTCGGGATTTCGACTCCGCTCGTCTCTGTTCTTCCAACGTTGAAA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:24029512-24029531
TCACAGGTAAATACCTATCTATGTATCTCC24029512GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTCGAAA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:23707451-23707470
TCACAGGTAAATACCTATCTATGTATCTCC23707451GATTGTTCGGGATTTCGACTCCGCTCATTTCTGTTCTTCCAACGTCGAAA
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:24856688-24856707
TCACAGGTAAATACCTATCTATGTATCTCC24856688GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica cultivar Red Fuji chromosome 4.
CP147796.1:25445287-25445306
TCACAGGTAAATACCTATCTATGTATCTCC25445287GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica cultivar Red Fuji chromosome 4.
CP147821.1:24970236-24970255
TCACAGGTAAATACCTATCTATGTATCTCC24970236GATTGTTCGGGATTTCGACTCCGCTCGTCTCTGTTCTTCCAACGTTGAAA
Malus ioensis cultivar PI590015 chromosome 4.
CP154727.1:28079482-28079501
TCACAGGTAAATACCTATCTATGTATCTCC28079482GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTCGAAA
Malus coronaria cultivar PI590014 chromosome 4.
CP154761.1:27649250-27649269
TCACAGGTAAATACCTATCTATGTATCTCC27649250GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTCGAAA
Malus coronaria cultivar PI590014 chromosome 4.
CP154778.1:26347839-26347858
TCACAGGTAAATACCTATCTATGTATCTCC26347839GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTCGAAA
Malus domestica cultivar WA 38 chromosome 4B.
CP165687.1:25375235-25375254
TCACAGGTAAATACCTATCTATGTATCTCC25375235GATTGTTCGGGATTTCGACTCCGCTCGTCTCTGTTCTTCCAACGTTGAAA
Malus domestica cultivar WA 38 chromosome 4A.
CP165704.1:24011074-24011093
TCACAGGTAAATACCTATCTATGTATCTCC24011074GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica cultivar Golden Delicious chromosome 04.
CP168768.1:25659972-25659991
TCACAGGTAAATACCTATCTATGTATCTCC25659972GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica cultivar Golden Delicious chromosome 04.
CP168785.1:25654816-25654835
AGTGTTGTAAGTTTTACACTATGTATCTCC25654816GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACATTGAAA
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:25112820-25112839
TCACAGGTAAATACTTATCTATGTATCTCC25112820GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica genome assembly, chromosome: 4.
OU696680.1:25129229-25129248
TCACAGGTAAATACCTATCTATGTATCTCC25129229GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica genome assembly, chromosome: 4.
OU744545.1:25083998-25084017
TCACAGGTAAATACCTATCTATGTATCTCC25083998GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Malus domestica genome assembly, chromosome: 4.
OU744956.1:25373772-25373791
TCACAGGTAAATACCTATCTATGTATCTCC25373772GATTGTTCGGGATTTCGACTCCGCTCGTCTCTGTTCTTCCAACGTTGAAA
Malus domestica genome assembly, chromosome: 4.
OU744994.1:25187400-25187419
TCACAGGTAAATACCTATCTATGTATCTCC25187400GATTGTTCGGGATTTCGACTCCGCTCGTTTCTGTTCTTCCAACGTTGAAA
Mecyna flavalis genome assembly, chromosome: 14.
OX439407.1:10703992-10704011
ATTATCATCTCTGTCTCAGATGGCTCTCCA10703992GATTGTTCGGGATTTCGACTGAGAGCATCGACGTGCATCATTTTACAGCC
Mecyna flavalis genome assembly, chromosome: 15.
OX439408.1:3932101-3932120
ATTATCATCTCTGTCTCAGATGGCTCTCCA3932101GATTGTTCGGGATTTCGACTGAGAGCATCGACGTGCATCATTTTACAGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/agtcgaaatcccgaacaatc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : agtcgaaatcccgaacaatc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.231 | 0.222 | search_plus_done; http://172.18.8.135:50800/match?q=AGTCGAAATCCCGAACAATC&k=0&no_gap=0&offset=0&limit=50
0.319 | 0.088 | search_minus_done; http://172.18.8.135:50800/match?q=GATTGTTCGGGATTTCGACT&k=0&no_gap=0&offset=0&limit=48
0.332 | 0.014 | cgi_end;

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