GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 15:54:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:18609287-18609310
GGTACCAGACTGCAGCACACTAGAATGATC18609287AGTTATATCGTCCTCCGGAGTATGAAAGCTAGAACAAGTCATTAAGTGGTGATC
BJ02053C08 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO909875.1:398-421
GATCACCACTTAATGACTTGTTCTAGCTTT398CATACTCCGGAGGACGATATAACTGATCATTCTAGTGTGCTGCAGTCTGGTACC
TSA: Capsicum annuum MGMT_Contig42434 mRNA sequence.
JW092678.1:1313-1336
GATCACCACTTAATGACTTGTTCTAGCTTT1313CATACTCCGGAGGACGATATAACTGATCATTCTAGTGTGCTGCAGTCTGGTACC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:250293312-250293335
GATCACCACTTAATGACTTGTTCTAGCTTT250293312CATACTCCGGAGGACGATATAACTGATCATTCTAGTGTGCTGCAGTCTGGTACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/agttatatcgtcctccggagtatg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : agttatatcgtcctccggagtatg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=AGTTATATCGTCCTCCGGAGTATG&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=CATACTCCGGAGGACGATATAACT&k=0&no_gap=0&offset=0&limit=49
0.206 | 0.002 | cgi_end;

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