GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-09 07:26:44, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:4047130-4047152
CAATTCCATCACCATCACCATCATCCTAAA4047130CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCTTCCCATCTCTCTC
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:4412681-4412703
CATCACCATCACCATCACCATCATCCTAAA4412681CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCTTCCCATCTCTCTC
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:4204465-4204487
CATCACCCTCACCATCACCATCATCCTAAA4204465CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCTTCCCATCTCTCTCTC
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:4740397-4740419
CTACTACAATTCCATCACCATCATCCTAAA4740397CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCCTTCCCATCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:4482161-4482183
CATCACCATCACCATCACCATCATCCTAAA4482161CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica cultivar Red Fuji chromosome 16.
CP147808.1:4432079-4432101
CATCACCATCACCATCACCATCATCCTAAA4432079CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica cultivar Red Fuji chromosome 16.
CP147817.1:4477468-4477490
CATCACCATCACCATCACCATCATCCTAAA4477468CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus ioensis cultivar PI590015 chromosome 16.
CP154739.1:4086494-4086516
CAATTCCATCACCATAACCATCATCCCAAA4086494CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCTTCCCATCTCTCTCTC
Malus ioensis cultivar PI590015 chromosome 16.
CP154756.1:4066394-4066416
CAATTCCATCACCATAACCATCATCCCAAA4066394CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCTTCCCATCTCTCTCTC
Malus coronaria cultivar PI590014 chromosome 16.
CP154773.1:4152643-4152665
CAATTCCATCACCATAACCATCATCCCAAA4152643CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCTTCCCATCTCTCTCTC
Malus coronaria cultivar PI590014 chromosome 16.
CP154790.1:4142247-4142269
CAATTCCATCACCATAACCATCATCCCAAA4142247CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCACCTTCCCATCTCTCTCTC
Malus domestica cultivar WA 38 chromosome 16B.
CP165699.1:4421622-4421644
CATCACCATCACCATCACCATCATCCTAAA4421622CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica cultivar WA 38 chromosome 16A.
CP165716.1:4045574-4045596
CAATTCCATCACCATCACCATCATCCTAAA4045574CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCCTTCCCATCTCTCT
Malus domestica cultivar Golden Delicious chromosome 16.
CP168780.1:4464469-4464491
CATCACCATCACCATCACCATCATCCTAAA4464469CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica cultivar Golden Delicious chromosome 16.
CP168797.1:4531070-4531092
CTACTACAATTCCATCACCATCATCCTAAA4531070CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCCCTTCCCATCTCTC
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:4195050-4195072
CATCACCCTCACCATCACCATCATCCTAAA4195050CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCTTCCCATCTCTCTCTC
Malus domestica genome assembly, chromosome: 16.
OU696692.1:4540591-4540613
CATCACCATCACCATCACCATCATCCTAAA4540591CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica genome assembly, chromosome: 16.
OU744557.1:4543626-4543648
CATCACCATCACCATCACCATCATCCTAAA4543626CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica genome assembly, chromosome: 16.
OU744968.1:4476093-4476115
CATCACCATCACCATCACCATCATCCTAAA4476093CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus domestica genome assembly, chromosome: 16.
OU745006.1:4554033-4554055
CATCACCATCACCATCACCATCATCCTAAA4554033CACCTAAAAAGTTTCTCCCCTTCTAAACCAACCCCCCCTTCCCATCTCTCTCT
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:4893882-4893904
CTACTACAATTCCATCACCATCATCCTAAA4893882CACCTAAAAAGTTTCTCCCCTTCTAAACCACCCCCCCCCCCTTCCCATCTCTC
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:3669610-3669632
CAATTCCATCACCATCATCATCATCCCAAA3669610CACCTAAAAAGTTTCTCCCCTTCTAAACCACTCCCCCCTTCCCATCTCTCTCT
Chaenomeles sinensis isolate sampleA chromosome 10.
CP162373.1:30128056-30128078
ATGGGAAGAGAGGGGGGGGGGGGTGGTTTA30128056GAAGGGGAGAAACTTTTTAGGTGTTTGGGATGATGGTGATGGTGATGGAATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cacctaaaaagtttctccccttc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cacctaaaaagtttctccccttc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50800/match?q=CACCTAAAAAGTTTCTCCCCTTC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.034 | search_minus_done; http://172.18.8.135:50800/match?q=GAAGGGGAGAAACTTTTTAGGTG&k=0&no_gap=0&offset=0&limit=28
0.143 | 0.001 | cgi_end;

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