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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-18 02:47:33, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cricetus cricetus genome assembly, chromosome: 2.
OZ199626.1:126757418-126757437
GGGTGAGGCTCTTTCATCCGGCCTCTTGCG126757418CATCCTCCTCTGCTGCTTCTCATGTTCGTTGTCAATAATGTCTATTTTTT
Canis lupus familiaris breed Labrador retriever chromosome 08a.
CP050567.1:48409213-48409232
GTCACCAGGATCTGCCAGGCGTCTTTGAAC48409213CATCCTCCTCTGCTGCTTCTCCTTCTCTTTCTCCATGGGCCCGTGCTCAA
Canis lupus familiaris breed Labrador retriever chromosome 17a.
CP050603.1:37758922-37758941
TAGTCTGCCCAGAGACTTCCAAGAATTCCG37758922CATCCTCCTCTGCTGCTTCTCAAAGTGTGACCCACATAGCACCAGCGACC
Canis lupus familiaris breed Labrador retriever chromosome 17b.
CP050614.1:37772957-37772976
TAGTCTGCCCAGAGACTTCCAAGAATTCCG37772957CATCCTCCTCTGCTGCTTCTCAAAGTGTGACCCACATAGCACCAGCGACC
Canis lupus familiaris breed Labrador retriever chromosome 08b.
CP050639.1:48405818-48405837
GTCACCAGGATCTGCCAGGCGTCTTTGAAC48405818CATCCTCCTCTGCTGCTTCTCCTTCTCTTTCTCCATGGGCCCTTGCTCAA
Sylvilagus floridanus genome assembly, chromosome: 13.
OX463235.1:25762252-25762271
TGGACCTAGTACTATTGAGACTTACCCTTT25762252CATCCTCCTCTGCTGCTTCTTTGCCTTATTATTATCAGTAACAACTTTTC
Vulpes vulpes genome assembly, chromosome: 13.
OZ067174.1:38609812-38609831
GTGTCTGCCCGGAGACTTCCAAGAATTCCG38609812CATCCTCCTCTGCTGCTTCTCAAAGTGTGACCCACATAGCACCAGCGACC
Vulpes vulpes genome assembly, chromosome: 13.
OZ067326.1:38180692-38180711
GTGTCTGCCCGGAGACTTCCAAGAATTCCG38180692CATCCTCCTCTGCTGCTTCTCAAAGTGTGACCCACATAGCACCAGCGACC
010701AAZA004558HT (AAZA) M9 xylem Malus domestica cDNA clone AAZA004558, mRNA sequence.
CN898165.1:165-184
CAAACTTCAATGTGGCATCAATCTGAAGGT165CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Mdst6008h22.y1 Mdst Malus domestica cDNA clone Mdst6008h22 5' similar to TR:Q9T0F7 Q9T0F7 HYPOTHETICAL 32.8 KD PROTEIN, mRNA sequence.
CV150001.1:37-56
CAAACTTCAATGTGGCATCAATCTGAAAGT37CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Mdst6011d23.y1 Mdst Malus domestica cDNA clone Mdst6011d23 5' similar to TR:Q9T0F7 Q9T0F7 HYPOTHETICAL 32.8 KD PROTEIN, mRNA sequence.
CV627364.1:167-186
CAAACTTCAATGTGGCATCAATCTGAAGGT167CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Guillardia theta EST, strain CCMP 327, clone sg05_016_a11.
HE990893.1:127-146
TGGAGAAGGTTGAGAAGGGAGAAGAGGCTG127CATCCTCCTCTGCTGCTTCTAACTCAGTCATCATCGAGCACTGTAAAAGC
CH261-93N4_RM1.1 CH261 Gallus gallus genomic clone CH261-93N4, genomic survey sequence.
CC275449.1:1143-1162
AATTTATCCCCCCCAGACGTCCACCGTTAT1143CATCCTCCTCTGCTGCTTCTATGACAACTCCGCGCTACCCCTCCCTACCT
Zea mays cultivar B73 chromosome 1 clone CH201-17M6, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces.
AC194413.4:103627-103646
CGCGACCACCGCTTCCCATATGTCACGCGA103627CATCCTCCTCTGCTGCTTCTGCTCTCCAACCCGGCGTCAGCTAGGTTTGA
Eragrostis tef cultivar Dabbi chromosome 2B.
CP137585.1:25574462-25574481
GGTGACGGCGACCAACTGCTGCTCCCTCCT25574462CATCCTCCTCTGCTGCTTCTCCACCGTCTCCGTCTCCTCCGAAAGGCCGG
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:27871342-27871361
CAAACTTCAATGTGGCATCAATCTGAAGGT27871342CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:51190757-51190776
CAACCCGCAATGTGGCATCAATCTCAAGGT51190757CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:28826388-28826407
CAAACTTCAATGTGGCATCAATCTGAAGGT28826388CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:44872753-44872772
CAAACCTCAATGTGGCATCAATCTCAAGGT44872753CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica cultivar Red Fuji chromosome 15.
CP147807.1:43233689-43233708
CAACCCGCAATGTGGCATCAATCTCAAGGT43233689CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica cultivar Red Fuji chromosome 15.
CP147816.1:42282158-42282177
CAAACCGCAATGTGGCATCAATCTCAAGGT42282158CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Chaenomeles sinensis isolate sampleA chromosome 09.
CP162372.1:23538986-23539005
CAAACTTCAATGTGGCATCAATCTGAAGGT23538986CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus domestica cultivar WA 38 chromosome 15B.
CP165698.1:50980854-50980873
CAAACCGCAATGTGGCATCAATCTCAAGGT50980854CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica cultivar WA 38 chromosome 15A.
CP165715.1:50799611-50799630
CAAACCGCAATGTGGCATCAATCTCAAGGT50799611CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica cultivar Golden Delicious chromosome 15.
CP168779.1:49862182-49862201
CAAACCGCAATGTGGCATCAATCTCAAGGT49862182CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica cultivar Golden Delicious chromosome 08.
CP168789.1:27633343-27633362
CAAACTTCAATGTGGCATCAATCTGAAGGT27633343CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus domestica cultivar Golden Delicious chromosome 15.
CP168796.1:50597572-50597591
CAACCCGCAATGTGGCATCAATCTCAAGGT50597572CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Triticum aestivum genome assembly, chromosome: 7D.
LR865780.1:632898647-632898666
CTCGGTTTTGTTCTTTGTGAGGGAGGTCAC632898647CATCCTCCTCTGCTGCTTCTTGGCCTCTGACGCGGCGTGCGACATGACCT
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:26770893-26770912
CAAACTTCAATGTGGCATCAATCTGAAGGT26770893CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:49323020-49323039
CAAACCGCAATGTGGCATCAATCTCAAGGT49323020CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica genome assembly, chromosome: 8.
OU696684.1:26620056-26620075
CAAACTTCAATGTGGCATCAATCTGAAGGT26620056CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus domestica genome assembly, chromosome: 15.
OU696691.1:51030322-51030341
CAAACCGCAATGTGGCATCAATCTCAAGGT51030322CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica genome assembly, chromosome: 15.
OU744556.1:50953911-50953930
CAAACCGCAATGTGGCATCAATCTCAAGGT50953911CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica genome assembly, chromosome: 8.
OU744960.1:26888718-26888737
CAAACTTCAATGTGGCATCAATCTGAAGGT26888718CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus domestica genome assembly, chromosome: 15.
OU744967.1:51448997-51449016
CAAACCGCAATGTGGCATCAATCTCAAGGT51448997CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus domestica genome assembly, chromosome: 8.
OU744998.1:27621727-27621746
CAAACTTCAATGTGGCATCAATCTGAAGGT27621727CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Malus domestica genome assembly, chromosome: 15.
OU745005.1:50511283-50511302
CAAACCGCAATGTGGCATCAATCTCAAGGT50511283CATCCTCCTCTGCTGCTTCTTCATCTTCCTCTTCACTATCTTCATTGTCA
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:27057170-27057189
CAAACTTCAATGTGGCATCAATCTGAAGGT27057170CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Triticum monococcum genome assembly, chromosome: 5A.
OY737862.1:184429631-184429650
CTGACGCACGCGTGAGTGCCTTGTCTTCTT184429631CATCCTCCTCTGCTGCTTCTTCTTCTTCCCCTGATCTGATGCGTTCGTGC
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:31876524-31876543
CAAACTTCAATGTGGCATCAATCTGAAGGT31876524CATCCTCCTCTGCTGCTTCTTCATCTTCCTCCTCACCATCTTCATAACCA
Solanum nigrum genome assembly, chromosome: 15.
OZ176026.1:303254-303273
CTGGAGAGGTTTGTGTCTCCCCCTGCCGAA303254CATCCTCCTCTGCTGCTTCTGGTCCTGCTTCATGCTCCCCCATGCTTTTT
Impatiens parviflora genome assembly, chromosome: 4.
OZ218207.1:37643680-37643699
GGTCTTCGTCGGTTCAGTCGTTCACTTCTT37643680CATCCTCCTCTGCTGCTTCTGCTAAACCGGATGATTCAGCCCCTTCATGC
Impatiens parviflora genome assembly, chromosome: 4.
OZ218207.1:49467660-49467679
CAGCATCCTCGGTCCGGTCGTCCACTTCTT49467660CATCCTCCTCTGCTGCTTCTTTTCTGGATGATTCAACCCCTTCATACATT
Impatiens parviflora genome assembly, chromosome: 9.
OZ218212.1:80677042-80677061
CGATCTTCTGCATCCGGTCGTCCACTTCTT80677042CATCCTCCTCTGCTGCTTCTGCTAAACCGGATGATTCAGCCCCTTCATGC
Scaeva pyrastri genome assembly, chromosome: 1.
LR989927.1:106080945-106080964
TTTTACCCTCATCTGGTACTCGGATTGGGA106080945CATCCTCCTCTGCTGCTTCTTTGGTCTAGAAATTCAGTTTCTGCTGATGT
Drosophila subobscura genome assembly, chromosome: E.
OY757497.1:14504727-14504746
GCCCTCTCACCCTGCACATCCTTTTGCCTT14504727CATCCTCCTCTGCTGCTTCTCTCTTGTCAGCATTCTTCCTTCTTCCCCTT
Cepaea hortensis genome assembly, chromosome: 7.
OY992882.1:42557069-42557088
AGCCATTCTGCTTCCTCCTCTTCTTCTCCT42557069CATCCTCCTCTGCTGCTTCTGCTGTTTTTTACCCTATTCCTCCTCCTCCT
Cepaea nemoralis genome assembly, chromosome: 13.
OZ073247.1:40292322-40292341
AGCCATTCTTCTTCCTCCTCTTCTTCTCCT40292322CATCCTCCTCTGCTGCTTCTGCTATTTTTTTCCCTCCTCCTCCTCCTCCT
Callyspongia manus genome assembly, chromosome: 4.
OZ218360.1:18380732-18380751
TAATCTGTCCTTCAACTGCTTCAATGACAC18380732CATCCTCCTCTGCTGCTTCTGGAATTAAGTTTCTTTATGTTAAATTACAA
Streptopelia turtur genome assembly, chromosome: 1.
LR594551.2:133577630-133577649
CCTCTTCCTCGTCTTCTTCCTCATCCTCCT133577630CATCCTCCTCTGCTGCTTCTTCCCAGGGAAATTACCCTGGCATGTGCGCT
Streptopelia turtur genome assembly, chromosome: 9.
LR594560.2:3228460-3228479
AGAGCCAGGCTGTTGTCCTGCACTCCGCCC3228460CATCCTCCTCTGCTGCTTCTCTTGGGATTGGCACACTCATCTCTCCAAGG
Somateria mollissima genome assembly, chromosome: 4.
OX598306.1:64814288-64814307
CCAAGCAGCGATGTAACGCACCTGGGCAAG64814288CATCCTCCTCTGCTGCTTCTCCCGGCTTGGATGCTGTGGAACACCAGGTG
Clangula hyemalis genome assembly, chromosome: 4.
OZ022430.1:65093789-65093808
CCAAGCAGCGATGTAACGCACCTGGGCAAG65093789CATCCTCCTCTGCTGCTTCTCCTGGCTTGGATGCTGTGGAACACCAGGTG
Calonectris borealis genome assembly, chromosome: 9.
OZ077819.1:3600965-3600984
AGAGCCAGGCTGTTGTCCTGCGCTCTGCCC3600965CATCCTCCTCTGCTGCTTCTCTTGGGATTGTCATACCCATCCCTCCAAGG
Gallinula chloropus genome assembly, chromosome: 8.
OZ175148.1:4726198-4726217
AGAGCCAGGTTGTTGTCCTGCACTCTGCCC4726198CATCCTCCTCTGCTGCTTCTCTTGGGATTCTCATACCCATCCCTGCAAGG
Scolopax rusticola genome assembly, chromosome: 6.
OZ199643.1:4831423-4831442
ATTATTTGAGTTCTTATCCTCCAGGATGTA4831423CATCCTCCTCTGCTGCTTCTTGGGACTTTTTCAGGAATGAACAGAGTAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/catcctcctctgctgcttct
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : catcctcctctgctgcttct | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.314 | 0.305 | search_plus_done; http://172.18.8.135:50800/match?q=CATCCTCCTCTGCTGCTTCT&k=0&no_gap=0&offset=0&limit=50
0.372 | 0.058 | search_minus_done; http://172.18.8.135:50800/match?q=AGAAGCAGCAGAGGAGGATG&k=0&no_gap=0&offset=0&limit=0
0.372 | 0.000 | cgi_end;

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