GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:25:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm34f03, 5' end, single read.
BJ561594.1:19-42
GAACTACATACTATACCA19CCCGCCCTTCTATTATTCATCCATCACTTACTTAGTTTGTGTTTCTCTCTCCCT
Ipomoea nil cDNA clone:jmsf30d07, 5' end.
CJ744898.1:15-38
GGCATACTATACCA15CCCGCCCTTCTATTATTCATCCATCACTTACTTAGTTTGTGTTTCTCTCTCCCT
Ipomoea nil cDNA clone:jmsf30e23, 5' end.
CJ744934.1:20-43
GGAACTACATACTATACCA20CCCGCCCTTCTATTATTCATCCATCACTTACTTAGTTTGTGTTTCTCTCTCCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cccgcccttctattattcatccat
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cccgcccttctattattcatccat | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.282 | 0.273 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGCCCTTCTATTATTCATCCAT&k=0&no_gap=0&offset=0&limit=50
0.365 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGATGAATAATAGAAGGGCGGG&k=0&no_gap=0&offset=0&limit=47
0.365 | 0.000 | cgi_end;

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