GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 16:56:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EST1224736 MTY Medicago truncatula cDNA clone MTYA951, mRNA sequence.
DW015775.1:140-159
CTGTTTTATAATCCACGAGAAAGTAATAAT140CGAGTTGAAGAACATGGGGTAAGTTCTGTTCGAAAAGAAGAGAAGGACTC
Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEY-200J18.
CT025687.4:242350-242369
CTGTTTTATAATCCACGAGAAAGTAATAAT242350CGAGTTGAAGAACATGGGGTAAGTTCTGTTCGAAAAGAAGAGAAGGACTC
Medicago truncatula clone mth2-18o15, complete sequence.
AC131239.20:52659-52678
CTGTTTTATAATCCACGAGAAAGTAATAAT52659CGAGTTGAAGAACATGGGGTAAGTTCTGTTCGAAAAGAAGAGAAGGACTC
Medicago truncatula clone mth2-150a17, complete sequence.
AC157538.19:45787-45806
CTGTTTTATAATCCACGAGAAAGTAATAAT45787CGAGTTGAAGAACATGGGGTAAGTTCTGTTCGAAAAGAAGAGAAGGACTC
mte1-26I18FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR306180.1:363-382
GAGTCCTTCTCTTCTTTTCGAACAGAACTT363ACCCCATGTTCTTCAACTCGATTATTACTTTCTCGTGGATTATAAAACAG
Medicago truncatula clone mth2-24m24, complete sequence.
AC124952.15:25433-25452
GAGTCCTTCTCTTCTTTTCGAACAGAACTT25433ACCCCATGTTCTTCAACTCGATTATTACTTTCTCGTGGATTATAAAACAG
M.truncatula DNA sequence from clone MTH2-3H12 on chromosome 3.
CT954236.4:110106-110125
GAGTCCTTCTCTTCTTTTCGAACAGAACTT110106ACCCCATGTTCTTCAACTCGATTATTACTTTCTCGTGGATTATAAAACAG
M.truncatula DNA sequence from clone MTH2-172L14 on chromosome 3.
CU062477.6:2298-2317
GAGTCCTTCTCTTCTTTTCGAACAGAACTT2298ACCCCATGTTCTTCAACTCGATTATTACTTTCTCGTGGATTATAAAACAG
Nasturtium officinale genome assembly, chromosome: 9.
OY978507.1:7559124-7559143
CATCTTGCTTAACTCCACCGAGCTCGGTGA7559124ACCCCATGTTCTTCAACTCGAAGATCGAGTGCTCGACACGCTCGAGCCTC
Thiohalobacter sp. COW1 DNA, complete genome.
AP024239.1:2864032-2864051
AGCTGTTCGAGCCGGGGCTGCAGTTCGTCA2864032ACCCCATGTTCTTCAACTCGCTGACCACCATGCATGCGCTGGTCATGATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/cgagttgaagaacatggggt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : cgagttgaagaacatggggt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.149 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGTTGAAGAACATGGGGT&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCCATGTTCTTCAACTCG&k=0&no_gap=0&offset=0&limit=46
0.186 | 0.004 | cgi_end;

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