GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 17:31:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS09055G10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA516272.1:275-298
AAAAAATTCCTAGAAAAGATTTGTCATAAT275GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
KS14053B03 KS14 Capsicum annuum cDNA, mRNA sequence.
GD062309.1:219-242
AAAAAATTCCTAAAAAAGATTTGTCATAAT219GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
KS14064F09 KS14 Capsicum annuum cDNA, mRNA sequence.
GD063395.1:219-242
AAAAAATTCCTAAAAAAGATTTGTCATAAT219GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
KS26050G07 KS26 Capsicum annuum cDNA, mRNA sequence.
GD134282.1:250-273
AAAAAATTCCTAGAAAAGATTTGTCATAAT250GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
CS01005F07 Hotpepper under oxidative stress Capsicum annuum cDNA 5', mRNA sequence.
GO345398.1:269-292
AAAAAATTCCTAGAAAAGATTTGTCATAAT269GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
TSA: Capsicum annuum MGMT_Contig8962, mRNA sequence.
JW059206.1:337-360
AAAAAATTCCTAGAAAAGATTTGTCATAAT337GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:274374129-274374152
CAAAAAATTCCTAGAAAAGATTGTCATAAT274374129GAATCACACTGTAAGTCCTTGTGGAGCAGCGGGTGCAGGTGCCTTGGGCTTTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:3014628-3014651
CCAAAGCCCAAGGCACCTGCACCCGCTGCT3014628CCACAAGGACTTACAGTGTGATTCATTATGACAATCTTTTCTAGGAATTTTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gaatcacactgtaagtccttgtgg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gaatcacactgtaagtccttgtgg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.780 | 0.772 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCACACTGTAAGTCCTTGTGG&k=0&no_gap=0&offset=0&limit=50
0.801 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CCACAAGGACTTACAGTGTGATTC&k=0&no_gap=0&offset=0&limit=43
0.802 | 0.001 | cgi_end;

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