GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:10:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Erinaceus europaeus genome assembly, chromosome: 20.
OX485830.1:4487384-4487407
AGTGCCAGATATTCAATTCAGAGATTGACA4487384GCTGCTTCCGCAAAGTTCATATTCTAATGAACACAAACAAGTAAACTAACACTG
Ipomoea nil cDNA clone:jmsf30b05, 5' end.
CJ744852.1:78-101
AACGGCAGCCCGACCCGACTCTCCCGCGCC78GCTGCTTCCGCAAAGTTCATATTCGTATACACTGTGTGTGGAAATATTTTTGCA
Ipomoea trifida cultivar NCNSP0306 chromosome 13.
CP025656.1:19863591-19863614
TCTGCAAAATATTTTCACACACATGTATAC19863591GAATATGAACTTTGCGGAAGCAGCGGCGCGGGAGAGTCGGGTCGGGCGGACGTT
Ipomoea triloba cultivar NCNSP0323 chromosome 13.
CP025672.1:28113655-28113678
TCTGCAAAATATTTTCACACACATGTATAC28113655GAATATGAACTTTGCGGAAGCAGCGGCGCGGGAGAGTCGGGTCGGGCGGACGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gctgcttccgcaaagttcatattc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gctgcttccgcaaagttcatattc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGCTTCCGCAAAGTTCATATTC&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GAATATGAACTTTGCGGAAGCAGC&k=0&no_gap=0&offset=0&limit=48
0.145 | 0.001 | cgi_end;

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