GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 08:38:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm10b09, 5' end, single read.
BJ553104.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm16e21, 5' end, single read.
BJ555136.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGNCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm17e06, 5' end, single read.
BJ555463.1:216-239
GCTGGATTTGCTGGGGATGATGCTCCGCGA216GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm28o24, 5' end, single read.
BJ559535.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm29a15, 5' end, single read.
BJ559569.1:211-234
GCTGGATTTGCTGGGGATGATGCTCCGCGA211GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm2p19, 5' end, single read.
BJ560193.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm32o01, 5' end, single read.
BJ561133.1:220-243
GCTGGATTTGCTGGGGATGATGCTCCGCGA220GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm33k19, 5' end, single read.
BJ561401.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGNCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm33m18, 5' end, single read.
BJ561437.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jm39o05, 5' end, single read.
BJ563351.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGNCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil cDNA clone:jmsf9l18, 5' end.
CJ753301.1:226-249
GCTGGATTTGCTGGGGATGATGCTCCGCGA226GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: jm43j04, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY923904.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: jm45d18, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924523.1:185-208
GCTGGATTTGCTGGGGATGATGCTCCGCGA185GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: jm45j16, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924662.1:220-243
GCTGGATTTGCTGGGGATGATGCTCCGCGA220GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: jm46e07, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924907.1:211-234
GCTGGATTTGCTGGGGATGATGCTCCGCGA211GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: jm49o23, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY926234.1:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: JMFS018C01, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY937245.1:201-224
CTGGATTTGCTGGGGATGATGCATCCGCGA201GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Ipomoea nil mRNA, clone: JMFS119A11, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY945127.1:172-195
GCTGGATTTGCTGGGGATGATGCTCCGCGA172GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
NTOM11033 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ969041.1:48-71
GCTGGGTTTGCTGGAGATGATGCTCCACGA48GCTGTATTCCCTAGCATTGTTGGCCGGCCCCGCCATACTGGTGTGATGGTGGGT
TSA: Ipomoea batatas Contig_5144.Ipbalsr mRNA sequence.
JP109732.1:213-236
GCTGGGTTTGCTGGGGATGATGCTCCACGA213GCTGTATTCCCTAGCATTGTTGGCCGCCCCCGTCACACTGGTGTCATGGTGGGT
Ipomoea nil actin 4 (ACT4) mRNA, complete cds.
HM802138.2:222-245
GCTGGATTTGCTGGGGATGATGCTCCGCGA222GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Cymbidium faberi actin (ACT1) mRNA, partial cds.
JN177718.1:46-69
GCCGGATTTGCTGGTGATGATGCACCTCGG46GCTGTATTCCCTAGCATTGTTGGCCGACCAAGGCACACCGGTGTTATGGTCGGG
Cymbidium faberi actin (ACT2) mRNA, partial cds.
JN177719.1:46-69
GCCGGATTTGCTGGTGATGATGCACCTCGG46GCTGTATTCCCTAGCATTGTTGGCCGACCAAGGCACACCGGTGTTATGGTCGGG
Cymbidium faberi actin (ACT3) mRNA, partial cds.
JN177720.1:46-69
GCCGGATTTGCTGGTGATGATGCACCTCGG46GCTGTATTCCCTAGCATTGTTGGCCGACCAAGGCACACCGGTGTTATGGTCGGG
Ipomoea purpurea actin 4 mRNA, complete cds.
JN882352.1:131-154
GCTGGGTTTGCTGGGGATGATGCTCCGCGA131GCTGTATTCCCTAGCATTGTTGGCCGTCCTCGTCACACTGGTGTGATGGTTGGT
Panax ginseng actin (ACT) mRNA, partial cds.
KU215664.1:61-84
GCTGGATTTGCAGGAGATGATGCTCCACGT61GCTGTATTCCCTAGCATTGTTGGCCGCCCCCGACATACTGGTGTGATGGTTGGC
Cymbidium sinense actin (ACT) mRNA, partial cds.
MW393697.1:46-69
GCCGGATTTGCTGGTGATGATGCACCTCGG46GCTGTATTCCCTAGCATTGTTGGCCGACCAAGGCACACCGGTGTTATGGTCGGG
Hedera helix genome assembly, chromosome: 8.
OX359271.1:35229898-35229921
GCTGGATTTGCAGGAGATGATGCTCCGCGT35229898GCTGTATTCCCTAGCATTGTTGGCCGCCCTCGACATACTGGTGTGATGGTTGGC
Hedera helix genome assembly, chromosome: 22.
OX359285.1:23412652-23412675
GCTGGATTTGCAGGAGATGATGCTCCGCGT23412652GCTGTATTCCCTAGCATTGTTGGCCGCCCCCGACATACTGGTGTGATGGTTGGC
Ipomoea triloba cultivar NCNSP0323 chromosome 3.
CP025662.1:15385042-15385065
ACCAACCATCACACCAGTGTGACGAGGACG15385042GCCAACAATGCTAGGGAATACAGCTCGTGGAGCATCATCCCCAGCAAATCCAGC
Hedera helix genome assembly, chromosome: 2.
OX359265.1:54518726-54518749
GCCTACCATCACACCGGTGTGACGTGGGCG54518726GCCAACAATGCTAGGGAATACAGCTCTTGGAGCATCATCTCCAGCAAATCCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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