GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:39:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf32m13, 5' end.
CJ745809.1:322-345
AAAATAACCTTAAAAAAATGGGGTTTTTGA322GCTTGTTTGGTGTTGTTCTGGTTGGTTTGATAGTAAGGTCTCAGCTAGGTAGTG
Ipomoea nil mRNA, clone: JMFS058D10, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY940449.1:462-485
AAAATAACCTTAAAAAAATGGGGTTTTTGA462GCTTGTTTGGTGTTGTTCTGGTTGGTTTGATAGTAAGGTCTCAGCTAGGTAGTG
Ipomoea nil mRNA, clone: JMFS135B05, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY946357.1:105-128
AAAATAACCTTAAAAAAATGGGGTTTTTGA105GCTTGTTTGGTGTTGTTCTGGTTGGTTTGATAGTAAGGTCTCAGCTAGGTAGTG
Ipomoea nil mRNA, clone: JMFS154H03, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY947885.1:496-519
AAAATAACCTTAAAAAAATGGGGTTTTTGA496GCTTGTTTGGTGTTGTTCTGGTTGGTTTGATAGTAAGGTCTCAGCTAGGTAGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gcttgtttggtgttgttctggttg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gcttgtttggtgttgttctggttg | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.370 | 0.361 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTGTTTGGTGTTGTTCTGGTTG&k=0&no_gap=0&offset=0&limit=50
0.400 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=CAACCAGAACAACACCAAACAAGC&k=0&no_gap=0&offset=0&limit=46
0.400 | 0.000 | cgi_end;

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