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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 01:41:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

HVSMEh0089C20f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0089C20f, mRNA sequence.
BE195490.1:469-492
TCAGTGCCGCGACCGTAACTGCCCCGACGC469GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HV_CEb0003G20f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0003G20f, mRNA sequence.
BE214429.3:103-126
TCAGTGCCGCGACCGTAACTGCCCCGACGC103GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HV_CEb0005M13f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0005M13f, mRNA sequence.
BE215091.3:453-476
TCAGTGCCGCGACCGTAACTGCCCCGACGC453GTATCACACGCCACCGGAGCCCAAGACCAAAGTTGCAGCGGCAACAGGAGGTTC
HV_CEb0008C09f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0008C09f, mRNA sequence.
BE215562.1:490-513
TCAGTGCCGCGACCGTAACTGCCCCGACGC490GTATCACACGCCACCGGAGCCCAAGAC
HWM020cH.02r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM020cH.02, mRNA sequence.
BE422160.1:323-346
TCAGTGCCGCGACCGTAACTGCCCCGACGC323GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEh0093J03f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0093J03f, mRNA sequence.
BE454290.3:470-493
TCAGTGCCGCGACCGTAACTGCCCCGACGC470GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCCGGAACAGGAGGGT
HVSMEh0094L24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0094L24f, mRNA sequence.
BE454610.2:604-627
TCAGTGCCGCGACCGTAACTGCCCCGACGC604GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HV_CEb0023G11f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0023G11f, mRNA sequence.
BE559281.3:36-59
TCAGTGNCCGCGACCGTAACTGCCCGACGC36GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEf0005E23f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0005E23f, mRNA sequence.
BF254881.3:457-480
TCAGTGCCGCGACCGTAACTGCCCCGACGC457GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEf0021L24f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0021L24f, mRNA sequence.
BF260344.3:469-492
TCAGTGCCGCGACCGTAACTGCCCCGACGC469GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGGAACAGGAGGGT
HV_CEa0010J12f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0010J12f, mRNA sequence.
BF264864.3:472-495
TCAGTGCCGCGACCGTAACTGCCCCGACGC472GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEl0001A03f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0001A03f, mRNA sequence.
BI946590.1:464-487
TCAGTGCCGCGACCGTAACTGCCCCGACGC464GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCACCAGGAGGTT
HVSMEm0005B15f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0005B15f, mRNA sequence.
BI952222.1:461-484
TCANTGCCGGGACCGTAACTGCCCCGACGC461GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGGAACAAGAGGTC
HVSMEm0021H14f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0021H14f, mRNA sequence.
BI955118.1:468-491
TCATTGCCGCGACCGTAACTGCCCCGACGC468GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEm0023H13f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0023H13f, mRNA sequence.
BI955529.1:463-486
TCAATGCCGCGACCGTAACTGCCCCGACGC463GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCGGCGGCAACAGGAGGTT
HVSMEm0025B11f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEm0025B11f, mRNA sequence.
BI955924.1:467-490
TCAGTGCCGCGACCGTAACTGCCCCGACGC467GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak15m19, 5' mRNA sequence.
BJ447040.1:449-472
TCAGTGCCGCGACCGTAACTGCCCCGACGC449GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak20o03, 5' mRNA sequence.
BJ448686.1:185-208
TCAGTGCCGCGACCGTAACTGCCCCGACGC185GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak26i02, 5' mRNA sequence.
BJ449742.1:439-462
TCAGTGCCGCGACCGTAACTGCCCCGACGC439GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak27n12, 5' mRNA sequence.
BJ450048.1:416-439
TCAGTGCCGCGACCGTAACTGCCCCGACGC416GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak40f02, 5' mRNA sequence.
BJ452766.1:321-344
TCAGTGCCGCGACCGTAACTGCCCCGACGC321GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cv.Akashinriki cDNA clone:baak46j23, 5' mRNA sequence.
BJ454221.1:172-195
TCAGTGCCGCGACCGTAACTGCCCCGACGC172GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HU02D18r HU Hordeum vulgare subsp. vulgare cDNA clone HU02D18 5-PRIME, mRNA sequence.
BQ464951.1:471-494
TCAGTGCCGCGACCGTAACTGCCCCGACGC471GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HT01K05T HT Hordeum vulgare subsp. vulgare cDNA clone HT01K05 5-PRIME, mRNA sequence.
BQ466120.1:479-502
TCAGTGCCGCGACCGTAACTGCCCCGACGC479GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HS09D24r HS Hordeum vulgare subsp. vulgare cDNA clone HS09D24 5-PRIME, mRNA sequence.
CA003033.1:459-482
TCAGTGCCGCGACCGTAACTGCCCCGACGC459GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGG
HT04F15r HT Hordeum vulgare subsp. vulgare cDNA clone HT04F15 5-PRIME, mRNA sequence.
CA012066.1:456-479
TCAGTGCCGCGACCGTAACTGCCCCGACGC456GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cDNA, clone: NIASHv2029G23, Normalized and subtracted barley full-length cDNA library from seedling shoot and root with ABA treatment, 5' end sequence.
DK648097.1:480-503
TCAGTGCCGCGACCGTAACTGCCCCGACGC480GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cDNA, clone: NIASHv2088F21, Normalized and subtracted barley full-length cDNA library from seedling shoot and root with ABA treatment, 5' end sequence.
DK669100.1:480-503
TCAGTGCCGCGACCGTAACTGCCCCGACGC480GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACTGGAGGTT
HO17P21S HO Hordeum vulgare cDNA clone HO17P21 5-PRIME, mRNA sequence.
DN183340.1:129-152
TCAGTGCCGCGACCGTAACTGCCCCGACGC129GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
HVSMEm0007L01f2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0041I02r, mRNA sequence.
GH225963.1:260-283
TCAGTGCCGCGACCGTAACTGCCCCGACGC260GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
X028 SSH sequences in leaves of rehydrated Tibetan hulless barley after drought Hordeum vulgare subsp. vulgare cDNA clone X028, mRNA sequence.
JK480112.1:75-98
TCAGTGCCGCGACCGTAACTGCCCCGACGC75GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0427I11, *** SEQUENCING IN PROGRESS ***, 46 unordered pieces.
AC259806.1:22004-22027
TCAGTGCCGCGACCGTAACTGCCCCGACGC22004GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0465N19, *** SEQUENCING IN PROGRESS ***, 46 unordered pieces.
AC262586.1:32338-32361
TCAGTGCCGCGACCGTAACTGCCCCGACGC32338GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare thaumatin-like protein TLP4 mRNA, complete cds.
AF355455.3:468-491
TCAGTGCCGCGACCGTAACTGCCCCGACGC468GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf116n19, mRNA sequence.
AK251422.1:620-643
TCAGTGCCGCGACCGTAACTGCCCCGACGC620GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
HG994378.1:5651168-5651191
TCAGTGCCGCGACCGTAACTGCCCCGACGC5651168GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR722620.1:7145954-7145977
TCAGTGCCGCGACCGTAACTGCCCCGACGC7145954GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR812265.1:7684782-7684805
TCAGTGCCGCGACCGTAACTGCCCCGACGC7684782GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR812974.1:7145954-7145977
TCAGTGCCGCGACCGTAACTGCCCCGACGC7145954GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR824636.1:7748608-7748631
TCAGTGCCGCGACCGTAACTGCCCCGACGC7748608GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828091.1:7885483-7885506
TCAGTGCCGCGACCGTAACTGCCCCGACGC7885483GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828098.1:7057504-7057527
TCAGTGCCGCGACCGTAACTGCCCCGACGC7057504GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828105.2:7097194-7097217
TCAGTGCCGCGACCGTAACTGCCCCGACGC7097194GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828119.1:7825641-7825664
TCAGTGCCGCGACCGTAACTGCCCCGACGC7825641GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828136.1:6867859-6867882
TCAGTGCCGCGACCGTAACTGCCCCGACGC6867859GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828143.1:7873744-7873767
TCAGTGCCGCGACCGTAACTGCCCCGACGC7873744GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828150.2:7291692-7291715
TCAGTGCCGCGACCGTAACTGCCCCGACGC7291692GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828164.1:7910141-7910164
TCAGTGCCGCGACCGTAACTGCCCCGACGC7910141GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828171.1:6864130-6864153
TCAGTGCCGCGACCGTAACTGCCCCGACGC6864130GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828178.1:7766499-7766522
TCAGTGCCGCGACCGTAACTGCCCCGACGC7766499GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828185.1:6877862-6877885
TCAGTGCCGCGACCGTAACTGCCCCGACGC6877862GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828192.1:6942414-6942437
TCAGTGCCGCGACCGTAACTGCCCCGACGC6942414GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828270.1:7859125-7859148
TCAGTGCCGCGACCGTAACTGCCCCGACGC7859125GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828277.1:7949996-7950019
TCAGTGCCGCGACCGTAACTGCCCCGACGC7949996GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR865399.1:6158507-6158530
TCAGTGCCGCGACCGTAACTGCCCCGACGC6158507GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR890100.1:7574884-7574907
TCAGTGCCGCGACCGTAACTGCCCCGACGC7574884GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OU015685.1:7360989-7361012
TCAGTGCCGCGACCGTAACTGCCCCGACGC7360989GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OU015705.1:8071854-8071877
TCAGTGCCGCGACCGTAACTGCCCCGACGC8071854GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459906.1:8917934-8917957
TCAGTGCCGCGACCGTAACTGCCCCGACGC8917934GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459913.1:10076086-10076109
TCAGTGCCGCGACCGTAACTGCCCCGACGC10076086GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459920.1:11249957-11249980
TCAGTGCCGCGACCGTAACTGCCCCGACGC11249957GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459927.1:7213928-7213951
TCAGTGCCGCGACCGTAACTGCCCCGACGC7213928GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459934.1:10744220-10744243
TCAGTGCCGCGACCGTAACTGCCCCGACGC10744220GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX459974.1:9031393-9031416
TCAGTGCCGCGACCGTAACTGCCCCGACGC9031393GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459981.1:10281479-10281502
TCAGTGCCGCGACCGTAACTGCCCCGACGC10281479GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX459988.1:11375420-11375443
TCAGTGCCGCGACCGTAACTGCCCCGACGC11375420GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX459995.1:6525368-6525391
TCAGTGCCGCGACCGTAACTGCCCCGACGC6525368GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX460002.1:10789552-10789575
TCAGTGCCGCGACCGTAACTGCCCCGACGC10789552GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460009.1:6725495-6725518
TCAGTGCCGCGACCGTAACTGCCCCGACGC6725495GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460016.1:9520857-9520880
TCAGTGCCGCGACCGTAACTGCCCCGACGC9520857GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460023.1:7446089-7446112
TCAGTGCCGCGACCGTAACTGCCCCGACGC7446089GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460030.1:8630772-8630795
TCAGTGCCGCGACCGTAACTGCCCCGACGC8630772GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX460037.1:10758109-10758132
TCAGTGCCGCGACCGTAACTGCCCCGACGC10758109GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460044.1:7564826-7564849
TCAGTGCCGCGACCGTAACTGCCCCGACGC7564826GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460051.1:7476737-7476760
TCAGTGCCGCGACCGTAACTGCCCCGACGC7476737GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460058.1:10530932-10530955
TCAGTGCCGCGACCGTAACTGCCCCGACGC10530932GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460064.1:8162665-8162688
TCAGTGCCGCGACCGTAACTGCCCCGACGC8162665GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460072.1:10971668-10971691
TCAGTGCCGCGACCGTAACTGCCCCGACGC10971668GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460079.1:10683455-10683478
TCAGTGCCGCGACCGTAACTGCCCCGACGC10683455GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460086.1:8918551-8918574
TCAGTGCCGCGACCGTAACTGCCCCGACGC8918551GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460093.1:9282785-9282808
TCAGTGCCGCGACCGTAACTGCCCCGACGC9282785GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460099.1:10471511-10471534
TCAGTGCCGCGACCGTAACTGCCCCGACGC10471511GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460107.1:9148948-9148971
TCAGTGCCGCGACCGTAACTGCCCCGACGC9148948GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460114.1:8979225-8979248
TCAGTGCCGCGACCGTAACTGCCCCGACGC8979225GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460121.1:7831855-7831878
TCAGTGCCGCGACCGTAACTGCCCCGACGC7831855GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460128.1:10715335-10715358
TCAGTGCCGCGACCGTAACTGCCCCGACGC10715335GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460135.1:7868150-7868173
TCAGTGCCGCGACCGTAACTGCCCCGACGC7868150GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460142.1:8221015-8221038
TCAGTGCCGCGACCGTAACTGCCCCGACGC8221015GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460149.1:10375485-10375508
TCAGTGCCGCGACCGTAACTGCCCCGACGC10375485GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460156.1:7320350-7320373
TCAGTGCCGCGACCGTAACTGCCCCGACGC7320350GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460163.1:9074052-9074075
TCAGTGCCGCGACCGTAACTGCCCCGACGC9074052GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460170.1:7115295-7115318
TCAGTGCCGCGACCGTAACTGCCCCGACGC7115295GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460177.1:10640061-10640084
TCAGTGCCGCGACCGTAACTGCCCCGACGC10640061GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460184.1:8602151-8602174
TCAGTGCCGCGACCGTAACTGCCCCGACGC8602151GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460191.1:9266482-9266505
TCAGTGCCGCGACCGTAACTGCCCCGACGC9266482GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460198.1:9589150-9589173
TCAGTGCCGCGACCGTAACTGCCCCGACGC9589150GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460205.1:8904056-8904079
TCAGTGCCGCGACCGTAACTGCCCCGACGC8904056GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460219.1:7910223-7910246
TCAGTGCCGCGACCGTAACTGCCCCGACGC7910223GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460226.1:7915780-7915803
TCAGTGCCGCGACCGTAACTGCCCCGACGC7915780GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460233.1:9115526-9115549
TCAGTGCCGCGACCGTAACTGCCCCGACGC9115526GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460240.1:8888294-8888317
TCAGTGCCGCGACCGTAACTGCCCCGACGC8888294GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460247.1:9473308-9473331
TCAGTGCCGCGACCGTAACTGCCCCGACGC9473308GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460254.1:8657852-8657875
TCAGTGCCGCGACCGTAACTGCCCCGACGC8657852GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460261.1:9526629-9526652
TCAGTGCCGCGACCGTAACTGCCCCGACGC9526629GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:9438643-9438666
TCAGTGCCGCGACCGTAACTGCCCCGACGC9438643GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460275.1:11095489-11095512
TCAGTGCCGCGACCGTAACTGCCCCGACGC11095489GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460282.1:7402182-7402205
TCAGTGCCGCGACCGTAACTGCCCCGACGC7402182GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460289.1:7164249-7164272
TCAGTGCCGCGACCGTAACTGCCCCGACGC7164249GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460296.1:9721294-9721317
TCAGTGCCGCGACCGTAACTGCCCCGACGC9721294GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:10162864-10162887
TCAGTGCCGCGACCGTAACTGCCCCGACGC10162864GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460310.1:10601156-10601179
TCAGTGCCGCGACCGTAACTGCCCCGACGC10601156GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590745.1:8425351-8425374
TCAGTGCCGCGACCGTAACTGCCCCGACGC8425351GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590752.1:10736483-10736506
TCAGTGCCGCGACCGTAACTGCCCCGACGC10736483GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 5H.
OX590759.1:7606274-7606297
TCAGTGCCGCGACCGTAACTGCCCCGACGC7606274GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638657.1:9286599-9286622
TCAGTGCCGCGACCGTAACTGCCCCGACGC9286599GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638746.1:8495915-8495938
TCAGTGCCGCGACCGTAACTGCCCCGACGC8495915GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGTTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638753.1:10212798-10212821
TCAGTGCCGCGACCGTAACTGCCCCGACGC10212798GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638760.1:8069564-8069587
TCAGTGCCGCGACCGTAACTGCCCCGACGC8069564GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638767.1:11428115-11428138
TCAGTGCCGCGACCGTAACTGCCCCGACGC11428115GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638774.1:7666091-7666114
TCAGTGCCGCGACCGTAACTGCCCCGACGC7666091GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638781.1:10484153-10484176
TCAGTGCCGCGACCGTAACTGCCCCGACGC10484153GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638788.1:10114281-10114304
TCAGTGCCGCGACCGTAACTGCCCCGACGC10114281GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX638795.1:10451776-10451799
TCAGTGCCGCGACCGTAACTGCCCCGACGC10451776GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638802.1:7463705-7463728
TCAGTGCCGCGACCGTAACTGCCCCGACGC7463705GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638809.1:10871433-10871456
TCAGTGCCGCGACCGTAACTGCCCCGACGC10871433GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638816.1:7259554-7259577
TCAGTGCCGCGACCGTAACTGCCCCGACGC7259554GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare genome assembly, chromosome: 5H.
OX638823.1:9434933-9434956
TCAGTGCCGCGACCGTAACTGCCCCGACGC9434933GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638830.1:7521091-7521114
TCAGTGCCGCGACCGTAACTGCCCCGACGC7521091GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638872.1:10225745-10225768
TCAGTGCCGCGACCGTAACTGCCCCGACGC10225745GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:9527345-9527368
TCAGTGCCGCGACCGTAACTGCCCCGACGC9527345GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737493.1:11368098-11368121
TCAGTGCCGCGACCGTAACTGCCCCGACGC11368098GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT
Hordeum bulbosum genome assembly, chromosome: 5H_4.
OY737514.1:10076118-10076141
TCAGTGCCGCGACCGTAACTGCCCCGACGC10076118GTATCACACGCCACCGGAGCCCAAGACCAAAGCTTGCAGCGGCAACAGGAGGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gtatcacacgccaccggagcccaa
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gtatcacacgccaccggagcccaa | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.968 | 0.959 | search_plus_done; http://172.18.8.135:50400/match?q=GTATCACACGCCACCGGAGCCCAA&k=0&no_gap=0&offset=0&limit=50
1.084 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGGCTCCGGTGGCGTGTGATAC&k=0&no_gap=0&offset=0&limit=0
1.084 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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