GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:12:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS20001E07 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093418.1:149-175
AAAACGGATCAGGACAAAGCTATAAAGATT149GTCTCTCCTTTGCTGTTACTGATGTTCCCGTCCTTGATGGAAAGACTCCAGTTGAAG
KS21011P12 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100253.1:254-280
AAAACGGATCAGGACAAAGCTATAAAGATT254GTCTCTCCTTTGCTGTTACTGATGTTCCCGTCCTTGATGGAAAGACTCCAGTTGAAG
90104 Capsicum annuum cv. L11 (under stress) cDNA-AFLP Capsicum annuum cDNA, mRNA sequence.
FE193219.1:164-190
CTTCAACTGGAGTCTTTCCATCAAGGACGG164GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTT
TSA: Capsicum annuum MGMT_Contig3633, mRNA sequence.
JW053877.1:1300-1326
CTTCAACTGGAGTCTTTCCATCAAGGACGG1300GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:236250773-236250799
CTTCAACTGGAGTCTTTCCATCAAGGACGG236250773GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:235660152-235660178
CTTCAACTGGAGTCTTTCCATCAAGGACGG235660152GAACATCAGTAACAGCAAAGGAGAGACAATCTTTATAGCTTTGTCCTGATCCGTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/gtctctcctttgctgttactgatgttc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : gtctctcctttgctgttactgatgttc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.285 | 0.277 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTCTCCTTTGCTGTTACTGATGTTC&k=0&no_gap=0&offset=0&limit=50
0.394 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=GAACATCAGTAACAGCAAAGGAGAGAC&k=0&no_gap=0&offset=0&limit=48
0.397 | 0.003 | cgi_end;

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