GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 19:56:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:48404-48425
CCTCGATTGCCCTAAGAAGTGCGTTTGATA48404TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGTTTTGATTTGAAACCT
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:119780-119801
CCTCGATTGCCCTAAGAAGTGCGTTTGATA119780TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGTTTTGATTTGAAACCT
Cicer arietinum chromosome Ca2.
CP039332.1:10534571-10534592
CCTCAATTGCTCTTGTAAGTGCTGTTGAAA10534571TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGCTTTGATTTGAAACCT
Cicer arietinum chromosome Ca2.
CP040767.1:10534567-10534588
CCTCAATTGCTCTTGTAAGTGCTGTTGAAA10534567TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGCTTTGATTTGAAACCT
Medicago lupulina genome assembly, chromosome: 8.
OY283146.1:17197703-17197724
CCTCAATTGCCCTAAGAAGTGCGTTTGATA17197703TTTCATCCCCTCTCACAAGATTATAGTCTATGTAAGTTTTTATTTGAAACCT
Sepiola atlantica genome assembly, chromosome: 7.
OY744521.1:56303113-56303134
GTCTTGAAGAATAAATCGGAAATGCTTGAC56303113TTTCATCCCCTCTCACAAGATTTCACCTTTGAATTTTACCTTTGTTCTTTGA
Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE.
CR954189.3:87783-87804
AGGTTTCAAATCAAAACCTACATAGACTAC87783AATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATCGAGG
Medicago arabica genome assembly, chromosome: 7.
OX326970.1:40502273-40502294
AGGTTTCAAATCAAAACGTACATAGACTAT40502273AATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATTGAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/tttcatcccctctcacaagatt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : tttcatcccctctcacaagatt | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCATCCCCTCTCACAAGATT&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=AATCTTGTGAGAGGGGATGAAA&k=0&no_gap=0&offset=0&limit=44
0.116 | 0.001 | cgi_end;

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