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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 02:40:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Triticum aestivum mRNA, clone: D03-tplb0033h06b, 3'-EST, cultivar Chinese Spring.
LU043457.1:768-787
GAAATTATTCATGTTCCAAGTGTATGTCCC768TTTGATGAACCCCTTCTTCCCGAACAAAGAGGTTCTGAACTGTGGTAGCC
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:12708555-12708574
TGTTTGTTTCAAGATTCAGACCCCGCCCTT12708555TTTGATGAACCCCTTCTTCCTTTCTCATCCCTACCTTCTCTCTCTCTCTC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:12507551-12507570
TGTTTGTTTCAAGATTCAGACCCCGCCCTT12507551TTTGATGAACCCCTTCTTCCTTTCTCATCCCTACCTTCTCTCTCTCTCTC
Pilophorus perplexus genome assembly, chromosome: 2.
OY037009.1:10624953-10624972
TCCAATTTAAAACAAAATAGGTTAAACACG10624953TTTGATGAACCCCTTCTTCCTCAAAATCATCGGGTCTCATGCTGACATTA
Hyperoodon ampullatus genome assembly, chromosome: 8.
OX457063.1:105794811-105794830
CCGCTCTCCTTTCTGAGACTCCTCAAGCCT105794811GGAAGAAGGGGTTCATCAAAGCTATGCTTCCTTTTAGTTATTTAAAATAT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:12612167-12612186
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12612167GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:12660596-12660615
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12660596GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:12124182-12124201
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12124182GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:13011878-13011897
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA13011878GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:12104970-12104989
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA12104970GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:12862545-12862564
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12862545GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:12868002-12868021
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12868002GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:12732046-12732065
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA12732046GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:11975149-11975168
GAGAGAGAGAGAGAAGGTAGGGATGAGAAA11975149GGAAGAAGGGGTTCATCAAAAAGGGCGGGGTCTGAATCTTGAAACAAACA

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