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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-20 13:13:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

LjNEST85h2r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
CB828376.1:274-298
CATTCTTAAATTGAACAAATACCTATAACA274CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA
LjNEST97h9r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
CB829422.1:274-298
CATTCTTAAATTGAACAAATACCTATAACA274CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT36K21, TM1302.
AP007973.2:42734-42758
CATTCTTAAATTGAACAAATACCTATAACA42734CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA
Lotus japonicus sljlb gene for leghemoglobin, partial cds.
AB042716.1:518-542
CATTCTTAAATTGAACAAATACCTATAACA518CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjT14E05, TM0089b.
AP004625.1:90734-90758
CATTCTTAAATTGAACAAATACCTATAACA90734CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:4294861-4294885
CATTCTTAAATTGAACAAATACCTATAACA4294861CTTGTTACATAATGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACAATAATAGCATTATGTAACAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACAATAATAGCATTATGTAACAAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=AACAATAATAGCATTATGTAACAAG&k=0&no_gap=0&offset=0&limit=50
0.181 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=CTTGTTACATAATGCTATTATTGTT&k=0&no_gap=0&offset=0&limit=50
0.186 | 0.004 | cgi_end;

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