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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-18 19:32:02, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RCG02748.
DE214305.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG
Trifolium pratense DNA, clone:RCG03929.
DE215271.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG
Trifolium pratense DNA, clone:RCG01068.
DE246714.1:170-189
GCATCGGTGGATTTAGGTTTAGGCATTTTC170ACAAACACTTGATGGGTGCAAATTCGACTG
Actenicerus siaelandicus genome assembly, chromosome: 2.
OZ174147.1:16600254-16600273
AAACTAAAGTGAATCTTCGAATTGGACGGC16600254ACAAACACTTGATGGGTGCATGGCTGCATATTTTAAATGGAGTGAACGCA
Actenicerus siaelandicus genome assembly, chromosome: 2.
OZ174147.1:59800656-59800675
AAACTAAAGTGAATATTCGAATTGGATGGT59800656ACAAACACTTGATGGGTGCACGGCTGCATATTTAAATGGAGTGAACGCAT
Actenicerus siaelandicus genome assembly, chromosome: 3.
OZ174148.1:83709475-83709494
AAACTAAAGTGAATCTTCGAATTGGATGGC83709475ACAAACACTTGATGGGTGCACGGCTGCATTTTAAATTGGAGTGAACGCAT
Bufo bufo genome assembly, chromosome: 10.
LR991676.1:54407136-54407155
GGATTACTGAGATTTTTATTGAAAGCATCA54407136ACAAACACTTGATGGGTGCAAAGTCACTAAACACAGAAATTAGGTCATCG
Trifolium pratense DNA, clone:RCG01882.
DE213617.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGAAAATGCCTAAACCTAAATCCACCGATGC
Trifolium pratense DNA, clone:RCG01985.
DE213702.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGAAAATGCCTAAACCTAAATCCACCGATGC
Trifolium pratense DNA, clone:RCG02252.
DE213912.1:11-30
CAGTCGAATT11TGCACCCATCAAGTGTTTGTGGAAATGCCTAAACCTAAATCCACCGATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAAACACTTGATGGGTGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAAACACTTGATGGGTGCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.394 | 0.386 | search_plus_done; http://172.18.8.135:50800/match?q=ACAAACACTTGATGGGTGCA&k=0&no_gap=0&offset=0&limit=50
0.582 | 0.187 | search_minus_done; http://172.18.8.135:50800/match?q=TGCACCCATCAAGTGTTTGT&k=0&no_gap=0&offset=0&limit=43
0.584 | 0.002 | cgi_end;

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