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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-17 18:27:59, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica napus cultivar Xiang5A chromosome 10.
CP151905.1:24706202-24706222
GATGATGACAACGAACATCATGCAATTTAT24706202ACAAGTCCTTCACGAGAGCCTCTTTCTACATCTCTCTCTCTCTCTTCTCTT
Brassica napus genome assembly, chromosome: A10.
HG994364.1:18731065-18731085
GATGATGACAACGAACATCATGCAATTTAT18731065ACAAGTCCTTCACGAGAGCCTCTTTCTACATCTCTCTCTCTCTCTCTCTTC
Brassica rapa genome, scaffold: A10.
LR031577.1:15670197-15670217
GATGATGACAACGAACATCATGCAATTTAT15670197ACAAGTCCTTCACGAGAGCCTCTTTCTACATCTCTCTCTCTCTCTTCTCTT
Brassica rapa genome assembly, chromosome: A10.
LS974626.2:18404540-18404560
GATGATGACAACGAACATCATGCAATTTAT18404540ACAAGTCCTTCACGAGAGCCTCTTTCTACATCTCTCTCTCTCTCTTCTCTT
Brassica napus cultivar Xiang5A chromosome 5.
CP123880.1:2008687-2008707
AAGAGAAGAGAGAGAGAGAGATGTAGAAAG2008687AGGCTCTCGTGAAGGACTTGTATAAATTGCATGATGTTCGTTGTCATCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAAGTCCTTCACGAGAGCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAAGTCCTTCACGAGAGCCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.378 | 0.369 | search_plus_done; http://172.18.8.135:50800/match?q=ACAAGTCCTTCACGAGAGCCT&k=0&no_gap=0&offset=0&limit=50
0.515 | 0.137 | search_minus_done; http://172.18.8.135:50800/match?q=AGGCTCTCGTGAAGGACTTGT&k=0&no_gap=0&offset=0&limit=46
0.516 | 0.001 | cgi_end;

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