GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2025-04-08 08:06:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

91-E022898-021-017-E23-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E2317Q, mRNA sequence.
CX187987.1:232-253

GTCACGAACCCAAGAAGAGCCACGCACCAA232ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

Brassica oleracea var. viridis mRNA, clone: KALE-057I08, 5' end sequence.
DK477532.1:249-270

GTCACGAACCCAAGAAGAGCCACGCACCAA249ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

Brassica oleracea var. viridis mRNA, clone: KALE-057I08, 3' end sequence.
DK537132.1:244-265

GTCACGAACCCAAGAAGAGCCACGCACCAA244ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

63JKCOT5_T3_018_C09_22JAN2005_075 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY021411.1:122-143

GTCACGAACCCAAGAAGAGCCACGCACCAA122ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

13JKBNM2_UP_011_H03_09DEC2003_017 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES264143.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

13JKBNM2_UP_012_B01_09DEC2003_013 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES264164.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_001_E01_25MAY2004_007 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265447.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGG

44JK5DM_UP_003_B10_25MAY2004_078 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265583.1:242-263

GTCACGAACCCAAGAAGAGCCACGCACCAA242ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_003_E02_25MAY2004_008 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265605.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_003_G10_25MAY2004_068 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265631.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_007_F05_26MAY2004_037 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265956.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_007_G04_26MAY2004_020 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265966.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_010_D01_26MAY2004_009 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES266189.1:247-268

GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

69JKME5D_T3_030_B06_28MAR2005_046 69JKME5D Brassica napus cDNA 5', mRNA sequence.
ES268598.1:169-190

GTCACGAACCCAAGAAGAGCCACGCACCAA169ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

JKBNM5_T7_012_E11_30JUN2004_087 JKBNM5 Brassica napus cDNA 3', mRNA sequence.
ES271839.1:187-208

GTCACGAACCCAAGAAGAGCCACGCACCAA187ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_014_C11_02JUL2006_091 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983430.1:179-200

GTCACGAACCCAAGAAGAGCCACGCACCAA179ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_015_A09_02JUL2006_079 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983494.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAGGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_016_B04_02JUL2006_030 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983581.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_019_C06_02JUL2006_044 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983820.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTA

44JK5DM_UP_021_H06_01JUL2006_034 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984023.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_023_F05_01JUL2006_037 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984132.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_024_B06_01JUL2006_046 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984175.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_024_C10_01JUL2006_076 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984190.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_024_D08_01JUL2006_058 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984200.1:180-201

GTCACGAACCCAAGAAGAGCCACGCACCAA180ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCG

44JK5DM_UP_028_E04_01JUL2006_024 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984534.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_032_G01_01JUL2006_003 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984851.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_037_A05_01JUL2006_047 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES985159.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAAACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_044_F11_4JULY2006_085 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES985833.1:248-269

GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

44JK5DM_UP_046_A02_4JULY2006_016 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES985942.1:174-195

GTCACGAACCCAAGAAGAGCCACGCACCAA174ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCT

44JK5DM_UP_047_H03_4JULY2006_017 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES986089.1:248-269

GTCACGAACCCAAGAAGAGCCACACACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

RR1AN85TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV526512.1:231-252

GAAACGAACCCAAGAAGAGCCACACACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR1AU67TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV527124.1:231-252

GAAACGAACCCAAGAAGAGCCACACACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR2AN17TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV536801.1:221-242

GAAACGAATCCAAGAAGAGCCACTCACAAA221ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR3AI14TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV549165.1:231-252

GAAACGAACCCAAGAAGAGCCACACACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR3BF31TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV552216.1:230-251

GAAACGAACCCAAGAAGAGCCACGCACAAA230ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR4B696TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EV569306.1:231-252

GAAACGAACCCAAGAAGAGCCACACACAAA231ACCATACAGGCTTTGGAGGCTAAGAAAGACTAGCTCTAACTGAAGCGGCCAG

RR4BJ02TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EV570409.1:231-252

GAAACGAACCCAAGAAGAGCCACACACAAA231ACCATACAGGCTTTGGAGGCTAAGAAAGACTAGCTCTAACTGAAGCGGCCAG

RS2BD40TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW726350.1:231-252

GAAACGAACCCAAGAAGAGCCACGCACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR1BZ07TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EX747317.1:230-251

GAAACGAACCCAAGAAGAGCCACACACAAA230ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR2BU12TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX754863.1:236-257

GAAACGAACCCAAGAAGAGCCACGCACAAA236ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR4CC49TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EX772139.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR4CE52TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EX772317.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAATTGAAGCGGCCA

RS1BY56TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EX887849.1:237-258

GAAACGAACCCAAGAAGAGCCACGCACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RS2BS62TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX895234.1:231-252

GAAACGAACCCAAGAAGAGCCACGCACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RS3CL82TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX905555.1:237-258

GAAACGAACCCAAGAAGAGCCACGCACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR1DS06TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY899176.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR2DW72TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EY907515.1:231-252

GAAACGAACCCAAGAAGAGCCACTCACAAA231ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR3EC09TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EY916937.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR4DY34TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY924086.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

RR1EG39TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD532053.1:237-258

GAAACGAACCCAAGAAGAGCCACACACAAA237ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:54682389-54682410

GTCACGAACCCAAGAAGAGCCACGCACCAA54682389ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA

Raphanus sativus genome assembly, chromosome: 7.
LR778316.1:31851142-31851163

GAAACGAACCCAAGAAGAGCCACGCACAAA31851142ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:4427641-4427662

GAAACGAACCCAAGAAGAGCCACGCACAAA4427641ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:5729610-5729631

GAAACGAACCCAAGAAGAGCCACGCACAAA5729610ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCATACAGGCTTTGGAGGCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATACAGGCTTTGGAGGCTA | format : html | download : | debug :

0.009 | 0.009 | search_start;
3.860 | 3.851 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATACAGGCTTTGGAGGCTA&k=0&no_gap=0&offset=0&limit=50
3.925 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=TAGCCTCCAAAGCCTGTATGGT&k=0&no_gap=0&offset=0&limit=0
3.926 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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