GGGenome | Results

Help | English

2025-04-15 06:32:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Callithrix jacchus chromosome chr11 clone CH259-40E8, complete sequence.
AC275478.1:7461-7480

GAATTAGTGCCAGAAGATAACTTCACTTTA7461ACTCTCTCATCCCCGAACCTATGCTCACAAGTCTGAGCATCTGGCTCTTA

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:124496457-124496476

GGTCTGCCACGTTTGTAGCTGCTATCAAAC124496457ACTCTCTCATCCCCGAACCTTGCGGTATAGTGAACCTGCAGCGCAGGGTA

Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:126215806-126215825

GGTCTGCCACGTTTGTAGCTGCTATCAAAC126215806ACTCTCTCATCCCCGAACCTTGCGGTATAGTGAACCTGCAGCGCAGGGTA

Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:123975613-123975632

GGTCTGCCACGTTTGTAGCTGCTATCAAAC123975613ACTCTCTCATCCCCGAACCTTGCGGTATAGTGAACCTGCAGCGCAGGGTA

Callithrix jacchus chromosome 11 clone CH259-120B21, complete sequence.
AC279259.1:67955-67974

TAAGAGCCAGATGCTCAGACTTGTGAGCAT67955AGGTTCGGGGATGAGAGAGTTAAAGTGAAGTTATCTTCTGGCACTAATTC

Peromyscus eremicus genome assembly, chromosome: 4.
OX460397.1:103521986-103522005

AAGTAGACGGGGAGAATGCTGAGAACAGAA103521986AGGTTCGGGGATGAGAGAGTGGGTCGGGAAGGGGTGGAGGGCTTAGCCCA

Peromyscus eremicus genome assembly, chromosome: 4.
OX460469.1:105755769-105755788

AAGTAGACGGGGAGAATGCTGAGAACAGAA105755769AGGTTCGGGGATGAGAGAGTGGGTCGGGAAGGGGTGGAGGGCTTAGCCCA

NLL_002055 Normal leaf cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpnla0_0025_A01.ab1, mRNA sequence.
JK169571.1:363-382

GGCGAGCTCATCAATGTTCACTATGCCGCA363AGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACC

RILL_002468 Ralstonia solanacearum challenged leaf cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocprla0_0029_G08.ab1, mRNA sequence.
JK191402.1:387-406

GGCGAGCTCATCAATGTTCACTATACCGCA387AGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACC

RILL_009021 Ralstonia solanacearum challenged leaf cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocprla0_0107_C03.ab1, mRNA sequence.
JK197955.1:366-385

GGCGAGCTCATCAATGTTCACTATACCGCA366AGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACC

Arachis hypogaea DNA, clone: 8iHA00A43, cultivar: YI-0311.
DE998455.1:147-166

TACCCTGCGCTGCAGGTTCACTATACCGCA147AGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACC

Callithrix jacchus clone CH259-40E8, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC202645.2:190048-190067

TAAGAGCCAGATGCTCAGACTTGTGAGCAT190048AGGTTCGGGGATGAGAGAGTTAAAGTGAAGTTATCTTCTGGCACTAATTC

TOG908531_1 Arachis duranensis Grif 15036 (Dur2-1) STS genomic PCR amplicon Arachis duranensis STS genomic, sequence tagged site.
GF111786.1:221-240

TACCCTGCGCTGCAGGTTCACTATACCGCA221AGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

タブ区切りテキスト → 表示 | ダウンロード
エクセル等の表計算ソフトに直接コピペできます。
CSV形式 → 表示 | ダウンロード
エクセル等の表計算ソフトにて開くことができます。
BED形式 → リンク | ダウンロード
GFF形式 → リンク | ダウンロード
JSON形式 → リンク | ダウンロード

Debug Info:

0.009 | 0.009 | search_start;
0.366 | 0.358 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCTCTCATCCCCGAACCT&k=0&no_gap=0&offset=0&limit=50
0.746 | 0.379 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTTCGGGGATGAGAGAGT&k=0&no_gap=0&offset=0&limit=46
0.752 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).