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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-19 22:11:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus genomic DNA, chromosome 2, clone: LjT10N22, TM0381.
AP004577.1:54321-54340
ATAGAATCAATAAAAAAAAAAGGTATTTCA54321AGAATGCTTACAGAGGAACCTAATAAACCATTAAGTTTCTTGCGGTATAT
Polygonum aviculare genome assembly, chromosome: 6.
OW204028.1:5600191-5600210
ATTAAGCGGAGGGTTAGTAGAATAAGAGGG5600191AGAATGCTTACAGAGGAACCAACTTGAGCTTGGCAATCGGCAAAGTTTCT
Aphrophora alni genome assembly, chromosome: 5.
OY740770.1:44325352-44325371
GTACAAGACGTTTGTGTCAGTTGGGTTCCA44325352AGAATGCTTACAGAGGAACCTAAGAAAAAGTGTATGGGCTCTGCTTTGTC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:80793857-80793876
ATATACCGCAAGAAACTTAATGGTTTATTA80793857GGTTCCTCTGTAAGCATTCTTGAAATACCTTTTTTTTTTATTGATTCTAT
Aphrophora alni genome assembly, chromosome: 5.
OY740770.1:10655462-10655481
ATCCACAACTGATTTTAGCGCTATTTTCTT10655462GGTTCCTCTGTAAGCATTCTTAGAACCTACCTACCATAAATCTTTTTGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAATGCTTACAGAGGAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAATGCTTACAGAGGAACC | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.125 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=AGAATGCTTACAGAGGAACC&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTCCTCTGTAAGCATTCT&k=0&no_gap=0&offset=0&limit=47
0.155 | 0.002 | cgi_end;

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