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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-20 15:04:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31.
AL096855.48:3869-3888
AGAGCCCGGAATTTTCATTACAACTTTCAA3869AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Homo sapiens DNA, chromosome 1, nearly complete genome.
AP023461.1:7897397-7897416
AGAGCCCGGAATTTTCATTACAACTTTCAA7897397AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Homo sapiens isolate CHM13 chromosome 1.
CP068277.2:7941232-7941251
AGAGCCCGGAATTTTCATTACAACTTTCAA7941232AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Homo sapiens isolate NA24385 chromosome 1.
CP139523.1:8092559-8092578
AGAGCCCGGAATTTTCATTACAACTTTCAA8092559AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Homo sapiens isolate NA24385 chromosome 1.
CP139546.1:8056638-8056657
AGAGCCCGGAATTTTCATTACAACTTTCAA8056638AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Mus musculus chromosome 5, clone RP24-512F21, complete sequence.
AC129946.9:533-552
AGGGAAGGGGCAGAGGACAGAGAGGCGGCA533AGAGAGCAAGAGGAGGAGGGCAAGCAGCCCCTTTTAGAGTGAGTCAGGCA
Onychomys torridus genome assembly, chromosome: X.
LR877211.1:44125616-44125635
AAAAGAGGAGGGGAGAGGGTAAGGGAAGAG44125616AGAGAGCAAGAGGAGGAGGGAAGTGACTGGTTAGAAAAAGAAAAAATGGA
Acomys dimidiatus genome assembly, chromosome: 6.
OU015379.1:134311062-134311081
GAAGCTGCTCACCCAAAGCAGCCAGAAAGT134311062AGAGAGCAAGAGGAGGAGGGTGTTGGTGTGACCCACTTCCTCCAGCCATC
Acomys percivali genome assembly, chromosome: 6.
OU015747.1:140640524-140640543
GAAGCTGCTCACCCAAAGCAGCCAGGAAGC140640524AGAGAGCAAGAGGAGGAGGGTGTTGGTGTGACCCACTTCCTCCAGCCATC
Heterocephalus glaber genome assembly, chromosome: 20.
OX090928.1:51914320-51914339
CAAAAATTATAAAACATATTTTTTAAAAAG51914320AGAGAGCAAGAGGAGGAGGGGAGGGAAGGGGAAGATTGAAGCAAATTGGG
Onychomys arenicola genome assembly, chromosome: X.
OX460370.1:152745300-152745319
AAAAGAGGAGGGGAGAGGGTAAGGGAAGAG152745300AGAGAGCAAGAGGAGGAGGGAAGTGACTGCTTAGGAAAAGAAGAAATGGA
Onychomys leucogaster genome assembly, chromosome: X.
OX460441.1:124248526-124248545
AAAAGAGGAGGGGAGAGGGTAAGGGAAGAG124248526AGAGAGCAAGAGGAGGAGGGAAGTGACTGGTTAGGAAAAGAAAAAATGGA
Onychomys arenicola genome assembly, chromosome: X.
OX460465.1:144155403-144155422
AAAAGAGGAGGGGAGAGGGTAAGGGAAGAG144155403AGAGAGCAAGAGGAGGAGGGAAGTGACTGCTTAGGAAAAGAAGAAATGGA
Onychomys torridus genome assembly, chromosome: X.
OX460905.1:123107304-123107323
AAAAGAGGAGGGGAGAGGGTAAGGGAAGAG123107304AGAGAGCAAGAGGAGGAGGGAAGTGACTGGTTAGAAAAAGAAAAAATGGA
Muscardinus avellanarius genome assembly, chromosome: 1.
OY726557.1:72823814-72823833
ACTCCTACATCACAGAGCCCCAGACACAAG72823814AGAGAGCAAGAGGAGGAGGGACCAGATATCATCACCAAGGCCACACTCCT
Muscardinus avellanarius genome assembly, chromosome: 6.
OY726562.1:27055494-27055513
AGAGAGGAGAGAAAGAGAGAAGAGAGAAAG27055494AGAGAGCAAGAGGAGGAGGGACCATATATAATCCCCAAGGCCAAACCCTA
Muscardinus avellanarius genome assembly, chromosome: 12.
OY726569.1:41420962-41420981
CTCTCACACCGTGGGGGGCAGGAAGCAGAG41420962AGAGAGCAAGAGGAGGAGGGAAGCAGATGTATTTTCCAAGGCCACACCCC
Canis lupus familiaris breed Labrador retriever chromosome 02a.
CP050574.1:53352131-53352150
GATTTCATTTATTTGAAAGAGATAAGACAC53352131AGAGAGCAAGAGGAGGAGGGAGTGGGGTGGGGAGGAGCAGAGGGGAGAGG
Canis lupus familiaris breed Labrador retriever chromosome 02b.
CP050613.1:53372401-53372420
GATTTCATTTATTTGAAAGAGATAAGACAC53372401AGAGAGCAAGAGGAGGAGGGAGTGGGGTGGGGAGGAGCAGAGGGGAGAGG
Sus scrofa scrofa breed NS chromosome 13.
CP071564.1:28743256-28743275
CCTGCAGGAGAAGCAAGGCGCCACTGTTGG28743256AGAGAGCAAGAGGAGGAGGGGCAGGACTGACATAATATCTTTCTCTGTGC
Canis lupus genome assembly, chromosome: 2.
HG994387.1:55721590-55721609
GATTTCATTTATTTGAAAGAGATAAGACAC55721590AGAGAGCAAGAGGAGGAGGGAGTGGGGTGGGGAGGAGCAGAGGGGAGAGG
Orcinus orca genome assembly, chromosome: 4.
OW443363.1:16179762-16179781
GGGGCGGGGGGCGGGCGGAGGGAGAGGAAG16179762AGAGAGCAAGAGGAGGAGGGAGCGGAGGGTGGGAGTTGTGCACAGTGAGG
Lagenorhynchus albirostris genome assembly, chromosome: 4.
OX459075.1:14764820-14764839
GGGGCGGGGGGCGGGCGGAGGGAGAGGAAG14764820AGAGAGCAAGAGGAGGAGGGAGCGGAGGGTGGGAGTTGTGCACAGTGAGG
Lagenorhynchus albirostris genome assembly, chromosome: 13.
OX459085.1:4781438-4781457
CATCTCACTGCTCCAACTGAGGTAAGAGAG4781438AGAGAGCAAGAGGAGGAGGGCATGACCTACACCCACCGTCAATCCGACCA
Sylvilagus floridanus genome assembly, chromosome: 4.
OX463226.1:3874856-3874875
TATTTATTTATTGGAAAAGGAGAGCATCGG3874856AGAGAGCAAGAGGAGGAGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA
Delphinus delphis genome assembly, chromosome: 5.
OX465330.1:14569523-14569542
GGGGCGGGGGGCGGGCGGAGGGAGAGGAAG14569523AGAGAGCAAGAGGAGGAGGGAGTGGAGGGTGGGAGTTGTGCACAGTGAGG
Sus scrofa genome assembly, chromosome: 13.
OY997220.1:41691158-41691177
CCTGCAGGAGAAGCAAGGCGCCACTGTTGG41691158AGAGAGCAAGAGGAGGAGGGGCAGGACTGACATAATATCTTTCTCTGTGC
Phocoena phocoena genome assembly, chromosome: 5.
OZ004761.1:14292120-14292139
GGGGCGGGGGGCGGGCGGAGGGAGAGGAAG14292120AGAGAGCAAGAGGAGGAGGGAGCGGAGGGTGGGAGTTGTGCACAGTGAGG
Sciaenops ocellatus chromosome 1.
CP136866.1:12846143-12846162
ATTCCCTGCTCCGCCATGTGGAAAATGGCA12846143AGAGAGCAAGAGGAGGAGGGGAAAGAGGCAAAAAAAAAAAGTGGAGGAAA
Salarias fasciatus genome assembly, chromosome: 20.
LR597455.1:30797416-30797435
TCTGGAAAAACAAGGAAACAAATTACAGGA30797416AGAGAGCAAGAGGAGGAGGGGCGGCCAAAATCCAGCCTTGAGGGGGAAAT
Myripristis murdjan genome assembly, chromosome: 10.
LR597559.1:13738980-13738999
TTTCCCTGCTCCTCCATGTGGAAAATGGCA13738980AGAGAGCAAGAGGAGGAGGGGAAGGAGGCAGAAAAGAGGAGGAGAAAGGA
Nibea albiflora genome assembly, chromosome: 9.
LR699032.1:9344873-9344892
ATTCCCTGCTCCGCCATGTGGAAAATGGCA9344873AGAGAGCAAGAGGAGGAGGGGAAAGAGGCAAAAAAAAAAAAAGTGGAGGA
Neostethus bicornis genome assembly, chromosome: 15.
LR738548.1:25729816-25729835
AGTGTATGTGTCTAGGGGGTGCGGCTAAAC25729816AGAGAGCAAGAGGAGGAGGGAATTTCCTAGCGTCTTTCTTGTTTTCGGCA
Trachurus trachurus genome assembly, chromosome: 5.
LR991633.1:33524896-33524915
GAGGGGAAGAGGAGAGACAGAGAGAGAAAG33524896AGAGAGCAAGAGGAGGAGGGAGGGGGGGGGGGGGGGGGTATCAAAAACAA
Larimichthys crocea genome assembly, chromosome: X.
LT972176.1:4179656-4179675
ATTCCCTGCTCCGCCATGTGGAAAATGGCA4179656AGAGAGCAAGAGGAGGAGGGGAAAGAGGCAAAAAAAAGTGGAGGAAAAAG
Pholis gunnellus genome assembly, chromosome: 9.
OU342811.1:7407699-7407718
GACGATAATCATGCACACAAAAGGGAGGGG7407699AGAGAGCAAGAGGAGGAGGGAGGTCGCACAATGTGGTCTGCTGACATTAT
Acipenser ruthenus genome assembly, chromosome: 36.
OV737717.1:7485757-7485776
AGGACTGAGCCTTGGGAGACACCTGCCGAA7485757AGAGAGCAAGAGGAGGAGGGTGAGCCATGCCAGGACACCCGGTTACGTGC
Electrona antarctica genome assembly, chromosome: 17.
OX578262.1:20924189-20924208
TAGAGGCAGCAGGGAGGAGGGAGAGGGAGG20924189AGAGAGCAAGAGGAGGAGGGGGGGCTATTCAAAGGCCAGACTTCTTCAGC
Xyrichtys novacula genome assembly, chromosome: 5.
OY660868.1:21226711-21226730
GAGAATTAAGAGAGGAGGATGAGAAAACAG21226711AGAGAGCAAGAGGAGGAGGGTGGAGGTGTTTAATGAGCTGAGAGTCGCCT
Chelon labrosus genome assembly, chromosome: 2.
OY741290.1:17093967-17093986
CCAACTGCGCGACAGAGACGTCGGCATCAG17093967AGAGAGCAAGAGGAGGAGGGCCTGAGATACAGAGAAAGAAGCAGGTACAA
Conger conger genome assembly, chromosome: 4.
OY741317.1:69549808-69549827
GTGAAGGAGCGAAGATCAAGGGAGAGTGAG69549808AGAGAGCAAGAGGAGGAGGGGAGGAGTTTGAGTCAAAGGGGGAAGAGACA
Conger conger genome assembly, chromosome: 16.
OY741329.1:21127958-21127977
GAGAGGAGGGGGAGAGCGAGAGACAGAGAG21127958AGAGAGCAAGAGGAGGAGGGAGAGTGAGAAAGAGAGAGAGGAGGGCAGAG
JP 2008518610-A/24242: Transcriptome Microarray Technology and Methods of Using the Same.
FU296299.1:3869-3888
AGAGCCCGGAATTTTCATTACAACTTTCAA3869AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 1166 from patent US 8216786.
GZ368887.1:65968-65987
AGAGCCCGGAATTTTCATTACAACTTTCAA65968AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2455 from patent US 8216786.
GZ370176.1:153-172
AGAGCCCGGAATTTTCATTACAACTTTCAA153AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGG
Sequence 190 from Patent EP2291553.
JA084547.1:34-53
AGAGCCCGGAATTTTCATTACAACTTTCAA34AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 190 from Patent EP2806054.
LQ933916.1:34-53
AGAGCCCGGAATTTTCATTACAACTTTCAA34AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 132 from patent US 10221454.
MM761988.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 133 from patent US 10221454.
MM761989.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2558 from patent US 10407724.
MO368017.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2559 from patent US 10407724.
MO368018.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 1166 from patent US 10584384.
MO941311.1:65968-65987
AGAGCCCGGAATTTTCATTACAACTTTCAA65968AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2455 from patent US 10584384.
MO942600.1:153-172
AGAGCCCGGAATTTTCATTACAACTTTCAA153AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGG
Sequence 190 from patent US 10865452.
MV996131.1:34-53
AGAGCCCGGAATTTTCATTACAACTTTCAA34AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2558 from patent US 11174516.
MY708372.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2559 from patent US 11174516.
MY708373.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 132 from patent US 11339439.
OO239463.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 133 from patent US 11339439.
OO239464.1:55962-55981
AGAGCCCGGAATTTTCATTACAACTTTCAA55962AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 1166 from patent US 11408034.
OO445257.1:65968-65987
AGAGCCCGGAATTTTCATTACAACTTTCAA65968AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Sequence 2455 from patent US 11408034.
OO446546.1:153-172
AGAGCCCGGAATTTTCATTACAACTTTCAA153AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGG
MAG: Proteobacteria bacterium isolate PRO23 chromosome.
CP053451.1:1779204-1779223
CGGGATGCTCCCGATCATACGACAACCATA1779204AGAGAGCAAGAGGAGGAGGGTGGTCCATGAACGATACCGTCAAATATCTG
Eukaryotic synthetic construct chromosome 1.
CP034487.1:8458424-8458443
AGAGCCCGGAATTTTCATTACAACTTTCAA8458424AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Eukaryotic synthetic construct chromosome 1.
CP034487.1:254593412-254593431
AGAGCCCGGAATTTTCATTACAACTTTCAA254593412AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Eukaryotic synthetic construct chromosome 1.
CP034512.1:8458424-8458443
AGAGCCCGGAATTTTCATTACAACTTTCAA8458424AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Eukaryotic synthetic construct chromosome 1.
CP034512.1:254593412-254593431
AGAGCCCGGAATTTTCATTACAACTTTCAA254593412AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
1M0504N17F Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0504N17 F, genomic survey sequence.
AZ641661.1:230-249
AGGGAAGGGGCTTAGGACTGAGAGGCGGCA230AGAGAGCAAGAGGAGGAGGGCGAGCAGCCCCTTTTACAGTGAGTCAAGCA
Sus scrofa genomic clone CH242-131F3, genomic survey sequence.
CT085434.1:592-611
CCTGCAGGAGAAGCAAGGCGCCACTGTTGG592AGAGAGCAAGAGGAGGAGGGGCAGGACTGACATAATATCTTTCTCTGTGC
OR_ABa0185G07.r OR_ABa Oryza ridleyi genomic clone OR_ABa0185G07 3', genomic survey sequence.
DX284363.1:734-753
TCTACAAATACTTCGCGATCGAATCGAGGG734AGAGAGCAAGAGGAGGAGGGCCGATCGCTTTCTCCCGAGCGCCGAGCTTC
Homo sapiens clone RP11-44F9, WORKING DRAFT SEQUENCE, 42 unordered pieces.
AC016049.2:48662-48681
AGAGCCCGGAATTTTCATTACAACTTTCAA48662AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Homo sapiens chromosome UNK clone CTD-2342J24, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces.
AC079745.1:83320-83339
AGAGCCCGGAATTTTCATTACAACTTTCAA83320AGAGAGCAAGAGGAGGAGGGAAAAAGATTTCACAAAAGCATTATCAAGGC
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-217H9.
CU915630.2:15606-15625
CCTGCAGGAGAAGCAAGGCGCCACTGTTGG15606AGAGAGCAAGAGGAGGAGGGGCAGGACTGACATAATATCTTTCTCTGTGC
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 58 unordered pieces.
FJ789650.1:333205-333224
GGGAGGAGGATCAAGATTGAGTGTAGATAG333205AGAGAGCAAGAGGAGGAGGGAGAGAAACGGGATTGCGAGGACGAGGAGAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB036G18, complete sequence.
AC189318.1:71860-71879
GGGAGGAGGATCAAGATTGAGTGTAGATAG71860AGAGAGCAAGAGGAGGAGGGAGAGAAACGGGATTGCGAGGACGAGGAGAA
Aegilops umbellulata cultivar TA1851 chromosome 2U.
CP136055.1:447478757-447478776
CGTGAGTCGTCACATCACAATCATGTCAAC447478757AGAGAGCAAGAGGAGGAGGGAGGGGTGGGGAGCTAACCTCGGGCACACTT
Warburgia ugandensis isolate CL-2023a chromosome 8.
CP141133.1:46699608-46699627
ATCCAATCGGAGGAGGGTTTTATGATGAAG46699608AGAGAGCAAGAGGAGGAGGGGGGGGATCGTGGCGCTTATTTTTTTTTAAT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:27731923-27731942
GGGAGGAGGATCAAGATTGAGTGTAGATAG27731923AGAGAGCAAGAGGAGGAGGGAGAGAAACGGGATTGCTAGGACGAGGAGAA
Brassica rapa genome, scaffold: A07.
LR031574.1:26729217-26729236
GGGAGGAGGATCAAGATTGAGTGTAGATAG26729217AGAGAGCAAGAGGAGGAGGGAGAGAAACGGGATTGCGAGGACGAGGAGAA
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:27072160-27072179
GGGAGGAGGATCAAGATTGAGTGTAGATAG27072160AGAGAGCAAGAGGAGGAGGGAGAGAAACGGGATTGCGAGGACGAGGAGAA
Avena sativa genome assembly, chromosome: 11.
OV702289.1:475930981-475931000
GGGAGTTCCATTTCAGGGACATGCAGAGGG475930981AGAGAGCAAGAGGAGGAGGGATCTTGCTCGATTTTTGGAGGAGGCCGAAG
Agrostemma githago genome assembly, chromosome: 12.
OY288250.1:56393514-56393533
GATAGAGAGCGGGGAGATAGGGAGAGAGAG56393514AGAGAGCAAGAGGAGGAGGGGGAGGGAGAAGGAGAGAAGGAGGGAAAGAG
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:52493762-52493781
TTGAAACCTATAGATTCGTTTGTGCATAGA52493762AGAGAGCAAGAGGAGGAGGGAGTTAGGCCATTTAATCAGTTGTTTAGGCG
Sepiola atlantica genome assembly, chromosome: 9.
OY744523.1:103032809-103032828
ACTCTGTTTTACTCATACTACAACAAACAG103032809AGAGAGCAAGAGGAGGAGGGAGCTCAAAGGCACATCTGTGATTTGTTACA
Sepia lycidas genome assembly, chromosome: 6.
OZ010576.1:64862251-64862270
AGAGAGGGAGGTATACACAATGCTGCCTCG64862251AGAGAGCAAGAGGAGGAGGGAGATGCAAAATTTCAGAGAGAGAGGGAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGAGCAAGAGGAGGAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGAGCAAGAGGAGGAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.080 | 1.071 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGAGCAAGAGGAGGAGGG&k=0&no_gap=0&offset=0&limit=50
1.164 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTCCTCCTCTTGCTCTCT&k=0&no_gap=0&offset=0&limit=0
1.164 | 0.000 | cgi_end;

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