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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-20 14:46:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 2812 from patent US 10006042.
MI847539.1:91-110
AAGCTCTCTGATTAATCCGAAAAATGTTGG91AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Sequence 2813 from patent US 10006042.
MI847540.1:67-86
AAGCTCTCTGATTAATCCGAAAAATGTTGG67AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTAGAATCGATC
Sequence 2812 from patent US 10337023.
MO170706.1:91-110
AAGCTCTCTGATTAATCCGAAAAATGTTGG91AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Sequence 2813 from patent US 10337023.
MO170707.1:67-86
AAGCTCTCTGATTAATCCGAAAAATGTTGG67AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTAGAATCGATC
Sequence 2812 from patent US 10774340.
MV704453.1:91-110
AAGCTCTCTGATTAATCCGAAAAATGTTGG91AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Sequence 2813 from patent US 10774340.
MV704454.1:67-86
AAGCTCTCTGATTAATCCGAAAAATGTTGG67AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTAGAATCGATC
Sequence 2812 from patent US 11499161.
OO872234.1:91-110
AAGCTCTCTGATTAATCCGAAAAATGTTGG91AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Sequence 2813 from patent US 11499161.
OO872235.1:67-86
AAGCTCTCTGATTAATCCGAAAAATGTTGG67AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTAGAATCGATC
BR072863 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-014E03 5', mRNA sequence.
EX086573.1:67-86
AAGCTCTCTGATTAATCCGAAAAATGTTGG67AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
BR093068 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-006B11 5', mRNA sequence.
EX106778.1:69-88
AAGCTCTCTGATTAATCCGAAAAATGTTGG69AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
BR097063 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-066C06 5', mRNA sequence.
EX110773.1:60-79
AAGCTCTCTGATTAATCCGAAAAGTGTTGG60AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
BR121840 root cDNA library KHRT Brassica rapa subsp. pekinensis cDNA clone KHRT-91H02 5', mRNA sequence.
EX138010.1:47-66
AAGCTCTCTGATTAATCCGAAAAATGTTGG47AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Brassica rapa subsp. oleifera cultivar Inbred line 'Chiifu' clone KBrH010M08, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC172873.1:15721-15740
AAGCTCTCTGATTAATCCGAAAAATGTTGG15721AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB012F17, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189226.2:138597-138616
AAGCTCTCTGATTAATCCGAAAAATGTTGG138597AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH138P04, complete sequence.
AC155338.1:90199-90218
AAAGCTCTCTGATTAATCCGAAAATGTTGG90199AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTAGAATCGATC
PCNA=proliferating cell nuclear antigen [Brassica napus=oilseed rape, cv. Westar, apical meristem, mRNA, 1004 nt].
S64617.1:55-74
AAGCTCTCTGATTAATCCGAAAAATGTTGG55AGCTACGTCTAGTTCAAGGCTCTCTCTTGAAGAAGGTGCTCGAATCGATC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_4436.
FX705587.1:944-963
GATCGATTCGAGCACCTTCTTCAAGAGAGA944GCCTTGAACTAGACGTAGCTCCAACATTTTTCGGATTAATCAGAGAGCTT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:52114629-52114648
GATCGATTCGAGCACCTTCTTCAAGAGAGA52114629GCCTTGAACTAGACGTAGCTCCAACATTTTTCGGATTAATCAGAGAGCTT
Brassica rapa genome, scaffold: A09.
LR031568.1:56184872-56184891
GATCGATTCTAGCACCTTCTTCAAAAGAGA56184872GCCTTGAACTAGACGTAGCTCCAACATTTTCGGATTAATCAGAGAGCTTT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:66709028-66709047
GATCGATTCTAGCACCTTCTTCAAAAGAGA66709028GCCTTGAACTAGACGTAGCTCCAACATTTTCGGATTAATCAGAGAGCTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCTACGTCTAGTTCAAGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTACGTCTAGTTCAAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.834 | 0.825 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTACGTCTAGTTCAAGGC&k=0&no_gap=0&offset=0&limit=50
0.876 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTTGAACTAGACGTAGCT&k=0&no_gap=0&offset=0&limit=34
0.879 | 0.003 | cgi_end;

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