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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-09 13:35:18, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:2581915-2581934
GTTCAGATTCTAAATCTGCCACTACTGACG2581915AGTAGAGAATCGGCCGTGTGATAGACTTACTTTGTGAAACAATAGTTTAT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:2895928-2895947
GTTCATATTCTAAATCCGCCACTACTTACG2895928AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus ioensis cultivar PI590015 chromosome 2.
CP154725.1:2772942-2772961
GTTCAAATTCTAAATCCCCCACTACTGACA2772942AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAATTTAT
Malus ioensis cultivar PI590015 chromosome 2.
CP154742.1:2690213-2690232
GTTCAAATTCTAAATCCCCCACTACTGACA2690213AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAATTTAT
Malus coronaria cultivar PI590014 chromosome 2.
CP154759.1:3038090-3038109
GTTCAAATTCTAAATCCCCCACTACTGACA3038090AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus coronaria cultivar PI590014 chromosome 2.
CP154776.1:2762355-2762374
GTTCAAATTCTAAATCCCCCACTACTGACA2762355AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica cultivar WA 38 chromosome 2B.
CP165685.1:3086726-3086745
GTTCATATTCTAAATCCGCTACTACTGATG3086726AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica cultivar WA 38 chromosome 2A.
CP165702.1:3258467-3258486
GTTCATATTCTAAATCCGCTACTACTGACG3258467AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica cultivar Golden Delicious chromosome 02.
CP168783.1:3256539-3256558
GTTCATATTCTAAATCCGCTACTACTGACG3256539AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:3120240-3120259
GTTCATATTCTAAATCCGCTACTACTGACG3120240AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3241450-3241469
GTTCATATTCTAAATCCGCTACTACTGACG3241450AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica genome assembly, chromosome: 2.
OU744954.1:3289271-3289290
GTTCATATTCTAAATCCGCTACTACTGACG3289271AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:32976682-32976701
ATAAACTATTGTTTCACAAAGTAAGCCTAT32976682CACACGGCCGATTCTCTACTCGTCAGTAGTGGTGGATTTAGAATCTGAAC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:35593988-35594007
ATAAACTATTGTTTCACAAAGTAAGCCTAT35593988CACACGGCCGATTCTCTACTCGTCATCAGTAGTAGCGGATTTAGAATATG
Malus domestica cultivar Red Fuji chromosome 2.
CP147819.1:35456296-35456315
ATAAACTATTGTTTCACAAAGTAAGCCTAT35456296CACACGGCCGATTCTCTACTCGTCAGTAGTGGTGGATTTAGAATCTGAAC
Malus x domestica clone Florina BAC 36I17, complete sequence.
GU295057.1:69700-69719
ATAAACTATTGTTTCACAAAGTAAGCCTAT69700CACACGGCCGATTCTCTACTCGTCAGTAGTAGCGGATTTAGAATATGAAC
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:33934488-33934507
ATAAACTATTGTTTCACAAAGTAAGCCTAT33934488CACACGGCCGATTCTCTACTCGTCGGTAGTAGCGGATATAGAATATGAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTAGAGAATCGGCCGTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTAGAGAATCGGCCGTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.347 | 0.338 | search_plus_done; http://172.18.8.135:50800/match?q=AGTAGAGAATCGGCCGTGTG&k=0&no_gap=0&offset=0&limit=50
0.450 | 0.103 | search_minus_done; http://172.18.8.135:50800/match?q=CACACGGCCGATTCTCTACT&k=0&no_gap=0&offset=0&limit=38
0.454 | 0.004 | cgi_end;

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