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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 23:30:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Danio aesculapii genome assembly, chromosome: 11.
LR812506.1:41834688-41834707
CTAATTTTCTTATTTTCTGCCCCTTTCTCA41834688ATCAAACAGAACAGCGGACCCATATTAATTCAACGAACAGCACAGGAGCC
Dianthus caryophyllus mRNA, clone: CES22G24, 5' end sequence.
FY390568.1:283-302
CTTCTTCCTAAACTTCTCAACTTGGTCAGC283ATCAAACAGAACAGCGGACCGATTACCCAGGTAAAACGGGTGGTTACCCG
Terriglobus roseus strain GAS232 genome assembly, chromosome: I.
LT629690.1:2974297-2974316
CTGCCCATCTCAGCCAATCTGGTGGAAGCA2974297ATCAAACAGAACAGCGGACCGCGTCTGGTAGTGGTTGGCGGCGCTGGCGG
Dianthus caryophyllus mRNA, clone: CES09E24, 5' end sequence.
FY385622.1:298-317
CGGGTAACCACCCGTTTTACCTGGGTAATC298GGTCCGCTGTTCTGTTTGATGCTGACCAAGTTGAGAAGTTTAGGAAGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAAACAGAACAGCGGACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAAACAGAACAGCGGACC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.186 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAAACAGAACAGCGGACC&k=0&no_gap=0&offset=0&limit=50
0.299 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=GGTCCGCTGTTCTGTTTGAT&k=0&no_gap=0&offset=0&limit=47
0.300 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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