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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-20 13:04:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 3.
LR862382.1:163057389-163057406
ATTCCCGTTTTACACCATTTAGTCTTAATC163057389CAAAGCAAAAACCGAAGCTTGTTACTTATTGTGAAAAGCAAAACAGCA
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:546344878-546344895
GTGCAATTGGAATAAGTAACCCTATTTGCC546344878CAAAGCAAAAACCGAAGCAGTAGAGACAGAGAGAAGAAGCCGGAGAAG
Bos taurus genome assembly, chromosome: 13.
LR962868.1:12900351-12900368
AACTCTTCATGACGGCCTAATCTGCCAGCC12900351CAAAGCAAAAACCGAAGCCTCCTCTGAAAGAAAAAAAAAAAACTTCCG
Bos gaurus x Bos taurus genome assembly, chromosome: 13.
OX258967.1:13503360-13503377
AACTCTTCATGACGGCCTAATCTGCCAGCC13503360CAAAGCAAAAACCGAAGCCTCCTCTGAAAGAAAAAAAAAAAACTTCCG
Bos taurus strain mammals genome assembly, chromosome: 13.
OX344702.1:16168158-16168175
AACTCTTCATGACGGCCTAATCTGCCAGCC16168158CAAAGCAAAAACCGAAGCCTCCTCTGAAAGAAAAAAAAAAAACTTCCG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 8.
OX596092.1:66068305-66068322
AACTCTTCATGACGGCCTAATCTGCCAACA66068305CAAAGCAAAAACCGAAGCCTCCTCTGAAAGGGAAAAAAAAAAAAACTT
Stenella coeruleoalba genome assembly, chromosome: 9.
OX596394.1:48145822-48145839
TTATAAAATTGATGACCAAACTAAACAAAC48145822CAAAGCAAAAACCGAAGCTCCTATATGTTAAAAACAATTTAGCTGATT
Bos taurus genome assembly, chromosome: Bta13.
OY997241.1:14585105-14585122
AACTCTTCATGACGGCCTAATCTGCCAGCC14585105CAAAGCAAAAACCGAAGCCTCCTCTGAAAGAAAAAAAAAAAAACTTCC
Phocoena phocoena genome assembly, chromosome: 9.
OZ004766.1:48691996-48692013
TTATAAAATTGATGACCAAACTAAACAAAC48691996CAAAGCAAAAACCGAAGCTCTTATATGTTAAAAAAAAAATTAGCTGAT
Microcaecilia unicolor genome assembly, chromosome: 3.
LR594634.1:134707599-134707616
TAAGGGAAAAAATAAAAGTTTTTTTTTAAA134707599CAAAGCAAAAACCGAAGCAAAAACGCTTCACTGTTGCTGAAGGCTCTT
Haliaeetus albicilla genome assembly, chromosome: 2.
OX381637.1:10170910-10170927
AACCTGGGTTTAGACAAGGGAAATCAATGG10170910CAAAGCAAAAACCGAAGCACTTGTTGATACCTGAATCCCATATTGACA
Valencia hispanica genome assembly, chromosome: 2.
OY747701.1:31009577-31009594
ATGTCATTTCTCTTCAGAAAAGGGAGAAAT31009577CAAAGCAAAAACCGAAGCCCTGAAGAAGGTCATCATCATGATACTGAA
Echiichthys vipera genome assembly, chromosome: 6.
OY829651.1:11573073-11573090
ATAAAAAGACAACTGGCACACTAACAGCAA11573073CAAAGCAAAAACCGAAGCTGAGAAGAGCAGTGAGTTAACATTAAAAAG
Chroicocephalus ridibundus genome assembly, chromosome: 12.
OZ001745.1:9575475-9575492
ACCCAGGGTTTGGACAAGAGAGATCAATAG9575475CAAAGCAAAAACCGAAGCACTTGTTACCTGAATCTTGTATTGTCAAAT
Prolixibacteraceae bacterium isolate 03360cef-1fb4-4bdc-8d3a-9e0c45a661a4 genome assembly, chromosome: 1.
OY782875.1:2887932-2887949
TATGACCAAAGCAGTACAACTAATTGGAAA2887932CAAAGCAAAAACCGAAGCCTCTGGCAATATGACCCTTGAAAGAATCCA
QGG24B14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG24B14, mRNA sequence.
BU000153.1:97-114
AGCACTCGTGGATAAAAACGAAGAGATGAG97CAAAGCAAAAACCGAAGCAGGGGAGGAAGGCCCAATTGTAACAGAGGT
TSA: Nitella mirabilis comp34487_c0_seq1 mRNA sequence.
JV748353.1:179-196
GCATACGACTGAGGATGATGAGCGGCTCAC179CAAAGCAAAAACCGAAGCCGTAGCACACGATGATGATGAGAAGGGACG
TSA: Trachemys scripta elegans comp256403_c0_seq1 mRNA sequence.
JW291179.1:56-73
ATGTTTCTGAGACGAGTCAGATGATACTTA56CAAAGCAAAAACCGAAGCATTCATGGACTCATTTCAGAACATTTTACA
TSA: Fagopyrum esculentum Unigene92535_laojing mRNA sequence.
JW740903.1:809-826
ACCGACGCTTATCCCGGTTGTTGCCAAGGT809CAAAGCAAAAACCGAAGCCAACCGCAACCTAGCTTGAGCCTTATCTTC
1092963869882 Global-Ocean-Sampling_GS-35-01-01-1P5KB marine metagenome genomic clone 1061002427142 3', genomic survey sequence.
ER456298.1:487-504
AAATATCGCGCGAAAAGTTAATATAAAACC487CAAAGCAAAAACCGAAGCTAACAAAATGAATGTAGCAAGGTCGAGTTT
PV_ABb019F23.F PV_ABb Panicum virgatum genomic 5', genomic survey sequence.
JM857985.1:774-791
AGATCCCAGGGATGAAGTAAAAAAGTCATA774CAAAGCAAAAACCGAAGCAAGAACTCATAGAAACGCTGAATTGGACGA
Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
AP015040.1:28862993-28863010
CACACCTTTTTGTCTTAGTTACTGAGGAAC28862993CAAAGCAAAAACCGAAGCTAAATCCCCTTGCTCAAAAAAATTAATTAA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:17075754-17075771
TTCCTCTTATAGGTGAAGCTCTATGAGCAT17075754CAAAGCAAAAACCGAAGCTTAAAAGTGACCACGCGAGTCAACTATTCC
Agrostemma githago genome assembly, chromosome: 1.
OY288239.1:71099503-71099520
AAATAAAACCTAACTCTTTAAACCCGAGTC71099503CAAAGCAAAAACCGAAGCTTACCCGGTATACTCGGTCATGCCACTCTA
Hibiscus tridactylites genome assembly, chromosome: 12.
OY288276.1:64866615-64866632
CAGAATTTGAATATAGGAAGTCAGACACCC64866615CAAAGCAAAAACCGAAGCACAAAGGCAACTGCGGGAAGGGTAAAGACG
Corynebacterium glutamicum R DNA, complete genome.
AP009044.1:735666-735683
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC735666CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Acinetobacter ursingii M3 DNA, chromosome 1, complete geonome.
AP018824.1:1097216-1097233
AGCCACTAAAGAAAACGATGTGGATGATAT1097216CAAAGCAAAAACCGAAGCATTACAAAACATCTTGATGCCAATCACGCA
Corynebacterium glutamicum SCgG1, complete genome.
CP004047.1:722674-722691
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC722674CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Corynebacterium glutamicum SCgG2, complete genome.
CP004048.1:722675-722692
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC722675CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
[Brevibacterium] flavum strain ATCC 15168, complete genome.
CP011309.1:641956-641973
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC641956CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Pontibacter akesuensis strain AKS 1T, complete genome.
CP014766.1:1995010-1995027
AGAAAGGCTACAGCGGCGTGGCCATACTTA1995010CAAAGCAAAAACCGAAGCACGTGCAAGTGGGCTGCGGCATAGAATGCT
Corynebacterium glutamicum strain YI chromosome, complete genome.
CP014984.1:637128-637145
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC637128CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Corynebacterium glutamicum ATCC 14067 chromosome, complete genome.
CP022614.1:638709-638726
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC638709CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Corynebacterium glutamicum strain BE chromosome, complete genome.
CP053188.1:227716-227733
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC227716CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Spongiibacter nanhainus strain csc3.9 chromosome, complete genome.
CP066167.1:3807554-3807571
CATTTTCTTCATCAATTAAGTTTTGCTACT3807554CAAAGCAAAAACCGAAGCAAAAATCAGTGCCGACTTTAGATGGCGTCT
Acinetobacter ursingii strain FDAARGOS_1096 chromosome, complete genome.
CP068176.1:866517-866534
AGCCACTAAAGAAAACGATGTGGATGATAT866517CAAAGCAAAAACCGAAGCATTACAAAACATCTTGATGCCAATCACGCA
[Brevibacterium] flavum strain CCM251 chromosome, complete genome.
CP079240.1:644185-644202
ACCTCCGAAGAAAATCGCAGCGTAGAGAGC644185CAAAGCAAAAACCGAAGCCAAAAACATGATGATGCCAGCAAGAAGTGG
Acinetobacter septicus strain FDAARGOS_1401 chromosome.
CP079898.1:2271878-2271895
AGCCACTAAAGAAAACGATGTGGATGATAT2271878CAAAGCAAAAACCGAAGCATTACAAAACATCTTGATGCCAATCACGCA
Acinetobacter ursingii strain RIVM_C011601 chromosome, complete genome.
CP089038.1:3606333-3606350
AGCCACTAAAGAAAACGATGTGGATGATAT3606333CAAAGCAAAAACCGAAGCATTACAAAACATCTTGATGCCAATCACGCA
Acinetobacter ursingii strain RIVM_C010559 chromosome, complete genome.
CP089051.1:3400432-3400449
AGCCACTAAAGAAAATGATGTGGATGATAT3400432CAAAGCAAAAACCGAAGCATTACAAAACATCTTGATGCCAATCACGCA
Acidocella sp. MX-AZ03 chromosome, complete genome.
CP110774.1:3012224-3012241
ACACGCGCCGGATGTCACGGTTGAAGAGAT3012224CAAAGCAAAAACCGAAGCCGACTTCGCCGTGGCTTTAGCCTAAAGTTT
Erynnis tages genome assembly, chromosome: 22.
LR990093.1:5147048-5147065
AATAGATTGACAGAAAAACTTTTACAAGTA5147048CAAAGCAAAAACCGAAGCACCTTAATGAGATCCTGGAGTTTTTGCATA
Noctua fimbriata genome assembly, chromosome: 29.
LR990950.1:5957997-5958014
AAATTCCGATAGTAAAATCTAAAGCAGATA5957997CAAAGCAAAAACCGAAGCTTGTTATAGTTACCGTAACTAATGAGGAGG
Malachius bipustulatus genome assembly, chromosome: 3.
OU342632.1:56292277-56292294
GACTGAAGTAACCATTGCGAGCGAGAGCAA56292277CAAAGCAAAAACCGAAGCTCCCACTCTTCATCCACGCATCAGGGTAGT
Philereme vetulata genome assembly, chromosome: 5.
OU975422.1:9510060-9510077
ACTATGCAGCAATGTTAAACAGCTTAACAC9510060CAAAGCAAAAACCGAAGCTTATTTAAGGAATGAAAAGTTTCTGAAAAT
Psylliodes chrysocephala genome assembly, chromosome: 8.
OV651820.1:30049195-30049212
TTTTCTTTTCAAATATAAAAATATGAAAAA30049195CAAAGCAAAAACCGAAGCAAGTTAAATGCTTGAAGGTTAGGAAACAAA
Volucella inflata genome assembly, chromosome: 1.
OV743716.1:31478786-31478803
AACGAGGTCAATGAAGAAAAAAACACGATA31478786CAAAGCAAAAACCGAAGCCTGTAAAGGTGAAGATCTTAATAAATTCTC
Anopheles bellator genome assembly, chromosome: 1.
OX030927.2:28069358-28069375
AGGAAATCAACATTACGATTCGTATTCAAG28069358CAAAGCAAAAACCGAAGCAATTAAGATTCCAATCCATTTGTAATGTTT
Cryptosula pallasiana genome assembly, chromosome: 2.
OX183131.1:42848958-42848975
AAAACAAATGTGTGAATATCAGATGCGTAA42848958CAAAGCAAAAACCGAAGCTGATAAAGCTCTACTAATTGCCAAGTCTAT
Gonocerus acuteangulatus genome assembly, chromosome: 1.
OX328123.1:68013987-68014004
AAAAAGAAACTGTCACAGGAAAAACAGTAA68013987CAAAGCAAAAACCGAAGCAAAAGTGTCCAGCCAAGACTGTAACAACCA
Ligdia adustata genome assembly, chromosome: 15.
OX346228.1:9195110-9195127
CATCAGCATACTGCACTTAACTTAATAAAA9195110CAAAGCAAAAACCGAAGCACGCAACTTTAAAATTGACCTTTAATAATA
Udea olivalis genome assembly, chromosome: 13.
OX376353.1:4518759-4518776
ATGGAACAGTCCATAATGGAGTCTACACAC4518759CAAAGCAAAAACCGAAGCGATTTGGCGACAAAATCATTGACATGACAT
Pyralis farinalis genome assembly, chromosome: 19.
OX382276.1:6324019-6324036
AGTTTTGACGACCTCTGTGGCGGAGTAATT6324019CAAAGCAAAAACCGAAGCTAGTGGGTTCGATTCCCACACAGGGCATAT
Lacanobia oleracea genome assembly, chromosome: 27.
OX493412.1:16549630-16549647
ACTCAAAAATACCATAAAAGAAGCAGCTGA16549630CAAAGCAAAAACCGAAGCTAAAGAAGTGAAAAACGAAGCAGACAAAAA
Polyploca ridens genome assembly, chromosome: 9.
OX596252.1:7712857-7712874
CAAGGAAATGTTCAAAATTGGGTACGTTGA7712857CAAAGCAAAAACCGAAGCCACATAAAATCTTGATGGACTATTATCATT
Mytilus edulis genome assembly, chromosome: 10.
OY782965.1:9755583-9755600
TTTTCTTTTAGCACATTCCTCGTGCAACTC9755583CAAAGCAAAAACCGAAGCTCATTAACGCAGGACATTGGGAAAGAGCCG
Symsagittifera roscoffensis genome assembly, chromosome: 10.
OY783243.1:3106944-3106961
ATGGCGAGAATTCTTGGGTGATTTTAACCA3106944CAAAGCAAAAACCGAAGCTACGCCGGAGAGTTTCAAAGAAGAGTGGGA
Philereme transversata genome assembly, chromosome: 14.
OZ004351.1:17179863-17179880
ACTATGCAGCAATGTTAAACAGCTTAACAC17179863CAAAGCAAAAACCGAAGCTTATTTAAGGAATGAAATGCTTCTAAAAAT
Tachinus rufipes genome assembly, chromosome: 8.
OZ010748.1:61906396-61906413
AGAACTAAGTTCTAAGAAAGCAGCAAATGT61906396CAAAGCAAAAACCGAAGCAGAACCAAGCAGCACCGACTCCAAAATGGC
Poecilus cupreus genome assembly, chromosome: 3.
OZ012716.1:30884885-30884902
TATTTTTTTTATTAATTTAAGAAAATTTCA30884885CAAAGCAAAAACCGAAGCTAAAACACTTTTCCTAAAACATCAAACAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAAGCAAAAACCGAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAAGCAAAAACCGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.351 | 0.342 | search_plus_done; http://172.18.8.135:50400/match?q=CAAAGCAAAAACCGAAGC&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.070 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCGGTTTTTGCTTTG&k=0&no_gap=0&offset=0&limit=0
0.422 | 0.000 | cgi_end;

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