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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-17 16:15:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 1391 from patent US 10750711.
MV606502.1:238-257
GACTGCTGCACATGGACCGGAGTAGAATGC238CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Sequence 1392 from patent US 10750711.
MV606503.1:483-502
GACTGCTGCACATGGACCGGAGTAGAATGC483CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Sequence 1391 from patent US 11819027.
OT844538.1:238-257
GACTGCTGCACATGGACCGGAGTAGAATGC238CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Sequence 1392 from patent US 11819027.
OT844539.1:483-502
GACTGCTGCACATGGACCGGAGTAGAATGC483CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
ss39e01.y1 Gm-c1061 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1061-1105 5' similar to TR:O48705 O48705 CF-2.2 LIKE PROTEIN, mRNA sequence.
BE805201.1:249-268
GACTGCTGCACATGGACCGGAGTAGAATGC249CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
su13f10.y1 Gm-c1066 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1066-1436 5' similar to TR:O48705 O48705 CF-2.2 LIKE PROTEIN, mRNA sequence.
BF324661.1:65-84
GACTGCTGCACATGGACCGGAGTAGAATGC65CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Glycine max clone cw162 disease resistance protein/LRR protein-related protein mRNA, complete cds.
FJ014841.1:238-257
GACTGCTGCACATGGACCGGAGTAGAATGC238CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Glycine max cultivar Williams 82 chromosome 6.
CP126431.1:53032805-53032824
GACTGCTGCACATGGACCGGAGTAGAATGC53032805CACTATAACAGCACCCGGGTCCAAAGATTATTCTTAACGGGTCAAAAACC
Glycine max cultivar Williams 82 chromosome 6.
CP126431.1:53035570-53035589
AACTGTTGCAAATGAACTGGAGTAGAATGT53035570CACTATAACAGCACCCGGGTCCTAAGGCTCTTCCTAAGGTGTCAAGTTTC
GC_Bb016F18.F GC_Bb Glycine cyrtoloba genomic 5', genomic survey sequence.
HR010742.1:841-860
TCGAATCGACCCGATAGGTAGAGGTTTTGG841ACCCGGGTGCTGTTATAGTGACATTCTACTCCAGTCAT
GC_Bb106J02.F GC_Bb Glycine cyrtoloba genomic 5', genomic survey sequence.
HR015739.1:870-889
TCGAATCGACCCGATAGGTAGAGGTTTTGG870ACCCGGGTGCTGTTATAGTGACATTCTACTCCAGTCCCTTTGCAGC
GS_ABa071N23.R GS_ABa Glycine stenophita genomic 3', genomic survey sequence.
JS150478.1:806-825
TCAAATCGACCCGATAGGTACAGGTTTTGG806ACCCGGGTGCTGTTATAGTGACATTCCACTCCAGTCCATTTGCAGCAGTC
Glycine max cultivar Williams 82 chromosome 6.
CP126431.1:53028383-53028402
TCGAACCGACCCGAAAGGTATAGGTTTTGG53028383ACCCGGGTGCTGTTATAGTGACATTCTACACCAGTCCATTTGCAGCAGTC
Sphenostylis stenocarpa genome assembly, chromosome: 5.
OY731402.1:54896508-54896527
TCGGGTTGACCCGATAAAGATAGTCTCTGG54896508ACCCGGGTGCTGTTATAGTGACATTCTACTCCGTTCCACTTGCAGCAGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTATAACAGCACCCGGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTATAACAGCACCCGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.379 | 0.370 | search_plus_done; http://172.18.8.135:50400/match?q=CACTATAACAGCACCCGGGT&k=0&no_gap=0&offset=0&limit=50
0.550 | 0.171 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCGGGTGCTGTTATAGTG&k=0&no_gap=0&offset=0&limit=41
0.553 | 0.003 | cgi_end;

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