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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-26 06:45:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Apis cerana ACCB08193 mRNA sequence.
JR046972.1:771-790
TTAAATCAATCGCGAAGAGAATCGAAATCA771CCAGAAGAATCACCAGCCATCATTATTGCCTCTAGACCTCACTCATCCAC
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:27381003-27381022
TTAGGTTCTCCCAACCTTAGATCAACGTCT27381003CCAGAAGAATCACCAGCCATGTCTGAAGAATAAGAAGAAGAAGAAGAAGG
Sylvilagus floridanus genome assembly, chromosome: 6.
OX463228.1:15454961-15454980
ATCTGCTGATTCACTCCCCAGATGACCACA15454961ATGGCTGGTGATTCTTCTGGGTCTCTCACATGGGTGCAGGGGCCCAATCA
Vigna angularis mRNA, clone: VES10H08.
HX946031.1:80-99
CTTCCTTCTTCTTCTTCTTATTCTTCAGAC80ATGGCTGGTGATTCTTCTGGAGACGTTGATCTAAGGTTGGGAGAACCTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGAAGAATCACCAGCCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAAGAATCACCAGCCAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGAAGAATCACCAGCCAT&k=0&no_gap=0&offset=0&limit=50
0.235 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGCTGGTGATTCTTCTGG&k=0&no_gap=0&offset=0&limit=48
0.236 | 0.001 | cgi_end;

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