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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-07 15:42:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Triticum timopheevii genome assembly, chromosome: 4G.
OY997268.1:251006620-251006638
GTTGAATTTCAACAGCCTACCGCTCTGCTT251006620CGCATGGTTTGGTTATGCAAGATTTGTATGCATGCATGTCGTTACACAT
Prunus persica PpDAM5 gene for dormancy-associated MADS-box5, complete cds.
AB932551.1:5063-5081
TATGAAGGAATTTGATTTGACGTTTTGATT5063TGCATAACCAAACCATGCGATAAAGCCAGCAGCAAATAGCTTCACGTTC
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:39252307-39252325
TATGAAGGAATTTGATTTGACGTTTTGATG39252307TGCATAACCAAACCATGCGATAAAGCCAGCAGCAAATAGCTTCACGTTC
Prunus persica clone BAC PpN089G02 evergrowing gene locus, complete sequence.
DQ863257.1:100131-100149
TATGAAGGAATTTGATTTGACGTTTTGATT100131TGCATAACCAAACCATGCGATAAAGCCAGCAGCAAATAGCTTCACGTTC
Triticum monococcum genome assembly, chromosome: 7A.
OY737856.1:27093672-27093690
ATTATGCCCATCATTTTCTGAAAGCAGAGA27093672TGCATAACCAAACCATGCGTACGTTAGCTTCTTCTTTGGGGCCGTTGAC
Triticum monococcum genome assembly, chromosome: 7A.
OY737864.1:25862220-25862238
ATTATGCCCATCATTTTCTGAAAGCAGAGA25862220TGCATAACCAAACCATGCGTACGTTAGCTTCTTCTTTGGGGCCGTTGAC
Triticum timopheevii genome assembly, chromosome: 7At.
OY997273.1:31815263-31815281
ATTATGCCCATCATTTTCTGAAAGCAGAGA31815263TGCATAACCAAACCATGCGTACGTTAGCTTCTTCTTTGGGGCCGTTGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCATGGTTTGGTTATGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCATGGTTTGGTTATGCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.087 | 0.078 | search_plus_done; http://172.18.8.135:50400/match?q=CGCATGGTTTGGTTATGCA&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TGCATAACCAAACCATGCG&k=0&no_gap=0&offset=0&limit=49
0.107 | 0.004 | cgi_end;

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