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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-24 18:35:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus genomic DNA, chromosome 1, clone: LjT40C16, TM0469.
AP007376.2:39194-39217
CTCTCATATTCTGTTACATTCAATTGGTTT39194CTAATATGGTATCAGAGCATATCCTAGATCAGTTTAGTGGAGACCACCCATATA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT37O24, TM0676.
AP007508.2:69777-69800
CTCTCATATTCTGTTACATTCAATTGGTTT69777CTAATATGGTATCAGAGCATATCCTAGATCAGTTTAGTGGAGACCACCCATATA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT45E22, TM1365.
AP008025.2:9199-9222
TTTTGTGGTTGAGTATTAGCCTCCCAATTT9199CTAATATGGTATCAGAGCATATCCTACATCCATTTGTTGTTTGTTGTGGAGACC
Lotus japonicus genomic DNA, chromosome 5, clone: LjT30K21, TM1873a.
AP010519.1:35661-35684
TTGGGGTAGATTTAGGCCTAACCCCAAATT35661CTAATATGGTATCAGAGCATATCCTGGATCTGTTTATTGGGCCACCTATGAATA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT09A07b, TM0181.
AP010654.1:85428-85451
TTTTGTGGTTGAGTATTAGCCTCCCAATTT85428CTAATATGGTATCAGAGCATATCCTACATCCATTTGTTGTTTGTTGTGGAGACC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:64836208-64836231
TTTTGTGGTTGAGTATTAGCCTCCCAATTT64836208CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTTGTGGAGACC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:108793328-108793351
CTCTCATATTCTGTTACATTCAATTGGTTT108793328CTAATATGGTATCAGAGCATATCCTAGATCAGTTTAGTGGAGACCACCCATATA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:76499703-76499726
TTTTGTGGTTGAGTATAGGCCTCCCAATTT76499703CTAATATGGTATCAGAGCATATCCTAGATCCAGTTGTTGTTTGTTGTGGAGACC
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:4726063-4726086
TTGGGGTAGATTTAGGCCTAACCCCAAATT4726063CTAATATGGTATCAGAGCATATCCTGGATCTGTTTATTGGGCCACCTATGAATA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:17764022-17764045
TTTTGTGGTTGAGTATAGGCCTCCCAATTT17764022CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTTGTGGAGACC
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:31258775-31258798
TTCTGTGGTTGAGTACAGGCATCACAAATT31258775CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTTGTGGAGACC
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:55769318-55769341
TCTATTAGAATTTAGTAGGCCTCTCAAATT55769318CTAATATGGTATCAGAGCATATCCTAGATCCGTTTGTTGTTTGTTGTGGAGACC
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:29222084-29222107
AAGGATGTGTTAGGCCGCCCAACCCCAATT29222084CTAATATGGTATCAGAGCATATCCCAAATCCATTGGTCTGGCTGCTATCAGCCT
Linaria vulgaris genome assembly, chromosome: 2.
OX415250.1:29027881-29027904
ATTTAGAAGGAAATATGGGGAATCTAAATT29027881CTAATATGGTATCAGAGCATATCCAAATTGATGTGGGTCTTGCCCACTAATCTA
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:55605390-55605413
TTTTGTGGTTGAATATAGGCCTCTCAAATT55605390CTAATATGGTATCAGAGCATATCCTAAATTCATTTGTTGTTTGTTGTGGTGAGA
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:1190511-1190534
TTTTGTGGTTGAGTATATGCCTCTCAAATT1190511CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTTGTGGAGACC
Trifolium subterraneum genome assembly, chromosome: 7.
OX637467.1:6107321-6107344
TTTTGTGGTTGAGTATATGCCTCTCAAATT6107321CTAATATGGTATCAGAGCATATCCTAGATCAATTTGTTGTTTGTTGTGGAGACC
Trifolium subterraneum genome assembly, chromosome: 7.
OX637467.1:55529454-55529477
TTTTGTGGTTGAGTATAGGCCTCTCAAATT55529454CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTTGTGGAGACC
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:22541781-22541804
TTTTGTGGTTGAGTATATGCCTCTCAAATT22541781CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGTCGTGGAGACC
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:48071156-48071179
CTTTTGTGGTTGAGTATAAGCCTCTAAATT48071156CTAATATGGTATCAGAGCATATCCTAGATCCGTTTGTTGATTGTTGTGGAGACC
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:48426694-48426717
GCTTTTGTGGTTGAGTATAGACATATCAGT48426694CTAATATGGTATCAGAGCATATCCTAGATCCATTTAGCAATGGAAAAAACATCA
Trifolium dubium genome assembly, chromosome: 5.
OX638066.1:6317098-6317121
TTTTGTGGTTGAGTATAGGCCTCCTAAATT6317098CTAATATGGTATCAGAGCATATCCTAGATCCATGCGTTGTTTGTTGTGGAGACC
Trifolium dubium genome assembly, chromosome: 8.
OX638069.1:27830475-27830498
TTTTGTGGTTGAGTATAGGCCTCCCAAATT27830475CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTGGAGACCTCCCATA
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:4551634-4551657
AATGGGCCGAATACAGATGCCTTCTAAATT4551634CTAATATGGTATCAGAGCATATCCTAGATCCATTTGTTGTTTGCTGTGGAGACC
Trifolium dubium genome assembly, chromosome: 11.
OX638072.1:3443159-3443182
ACAGCTTAAGCTTTTGGGATAATCGGTCAT3443159CTAATATGGTATCAGAGCATATCCTAGATCCATTTATTGTTTGTTGTGGAGACC
GC_Bb140O14.F GC_Bb Glycine cyrtoloba genomic 5', genomic survey sequence.
HR007944.1:525-548
AACATGGTGGGTGGCCCATTAATGGATCTA525GGATATGCTCTGATACCATATTAGAATGTAGGTTTGGACCTAACTCAACCTCAA
GC_Bc049E11.R GC_Bc Glycine canescens genomic 3', genomic survey sequence.
JS023771.1:139-162
ACATGGTGGGTGACCCTTTGAATGAATCTT139GGATATGCTCTGATACCATATTAGATTCTTAGAATGTGAGTTTGGGCCTAACTC
Lotus japonicus genomic DNA, chromosome 1, clone: LjT43B20, TM0117b.
AP004945.1:58799-58822
TATATGGGTGGTCTCCACTAAACTGATCTA58799GGATATGCTCTGATACCATATTAGAAACCAATTGAATGTAACAGAATATGAGAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:26589746-26589769
GGTCTCCACAACAAACAACAAATGGATCTA26589746GGATATGCTCTGATACCATATTAGAAATTAGAAGGACTCAAAAGTCCAAACCCT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:26864487-26864510
GGTCTCCACAACAAACAACAAATAGATCTA26864487GGATATGCTCTGATACCATATTAGAAATTGGGAGGCCTATACTCAACCATAAAA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:79856289-79856312
GGTCTCCACAACAAACAACAAATGGATCTA79856289GGATATGCTCTGATACCATATTAGAAATTGGGAGGCCTATACTCAACCACAAAA
Corylus americana cultivar Rush chromosome 2.
CP125815.1:32262806-32262829
CAATGGGAGACGGTGGGCCACAGTTAATTG32262806GGATATGCTCTGATACCATATTAGAAATGGGTCTTGGACCTTTTTCTTCTTTTC
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:49202896-49202919
GGTCTCCACAACAAACAACAAATGGATCTA49202896GGATATGCTCTGATACCATATTAGAATTTGTGAGGCCTAAACTCAACCACAAAA
Corylus avellana genome assembly, chromosome: ca2.
LR899424.1:37110833-37110856
CAATGGGAGACGGTGGGCCACAGTTAATTG37110833GGATATGCTCTGATACCATATTAGAAATGGGTCTTGGACCTTTTTCTTCTTTTC
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:31313510-31313533
GGTCTACACAATAAACAACAAATGAATCTA31313510GGATATGCTCTGATACCATATTAGAATTTGAGAGGTCTATATTCAACCACAAAA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:2065396-2065419
GGTCTCCACAACAATCAACAAATGAATTTA2065396GGATATGCTCTGATACCATATTAGAATTTGACATGCCTATAGTTAACCACAAAA
Trifolium subterraneum genome assembly, chromosome: 6.
OX637466.1:6221203-6221226
GGTCTCCACAACAAACAACAAATGGATCTA6221203GGATATGCTCTGATACCATATTAGAATTTGAGAGGCATATACTTAACCACAAAA
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:22981558-22981581
GATCTCCACAACAAATAACAGATGGATCTA22981558GGATATGCTCTGATACCATATTAGAATTTGGAAGACCTATGCTCAACCACAAAA
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:49813086-49813109
GGCCTTCACAACAAACAACAAATGAATCTA49813086GGATATGCTCTGATACCATATTAGAATTTAAGAGACTTATAATCAACCACAAAA
Trifolium dubium genome assembly, chromosome: 6.
OX638067.1:27623347-27623370
GGTCTCCACAGCAAACAACAAATGGATTTG27623347GGATATGCTCTGATACCATATTAGAATTTGGGAGGCATGTATTCAATCACAAAA
Astragalus glycyphyllos genome assembly, chromosome: 3.
OY754309.1:64455833-64455856
TGCGCAATAGCGGGTGACCCCGCGGATTTT64455833GGATATGCTCTGATACCATATTAGAATTTGGGTTTGGCCTAACTCAACCCTACA
Alisma plantago-aquatica genome assembly, chromosome: 7.
OY856415.1:605778979-605779002
GGGTTAAGATCACCGAGAAGCAACACTCTC605778979GGATATGCTCTGATACCATATTAGAATTTGTGGTATTCGACCCAAAATCAATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAATATGGTATCAGAGCATATCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAATATGGTATCAGAGCATATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=CTAATATGGTATCAGAGCATATCC&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=GGATATGCTCTGATACCATATTAG&k=0&no_gap=0&offset=0&limit=25
0.252 | 0.012 | cgi_end;

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