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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-15 02:26:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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RR1A156TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV524497.1:218-239
TCCGCCTCCTCTCCTGTTAAGCCATGGCTT218CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGCCG
RS2AN75TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW724401.1:169-190
TCCGCCTCCTCTCCTGTTAAACCATGGCTT169CTCCACTTCCTCCTTGCTTCATCATTTCTGTTTTTTGTTTGGATTACTGCCG
RR1F137TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD533919.1:126-147
TTCGCCTCCTCTCCTGTTAAGCCATGGCTT126CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGCCG
RS2FT75TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD571711.1:124-145
TCCGCCTCCTCTCCTGTTAAGCCATGGCTT124CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGTCG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_37707.
FX792602.1:265-286
TCCGCCTCCTCTCCTGTTAAACCATGGCTT265CTCCACTTCCTCCTTGCTTCATCATTTCTGTTTTTTGTTTGGATTACTGCCG
TSA: Raphanus sativus RS18119 mRNA sequence.
JT802666.1:37-58
TCCGCCTCCTCTCCTGTTAAGCCATGGCTT37CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGCCG
BOHCJ65TR BOHC Brassica oleracea genomic clone BOHCJ65, genomic survey sequence.
BH489018.1:260-281
CTAGTCTCTGCCCTCTCACGCTTCTGTCTC260CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCGG
BOHLH63TF BOHL Brassica oleracea genomic clone BOHLH63, genomic survey sequence.
BH537554.1:417-438
CCTAGCCTCTACCCTCTCAAGCTTCGTCTT417CTCCACTTCCTCCTTGCTTCATCTCTTCTGTTTATCGTCGGGTTGCGGCCGG
BOIDL17TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIDL17, genomic survey sequence.
CC963265.1:150-171
CTAGTCTCTGCCCTCTCACGCTTCTGTCTC150CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB018K09, complete sequence.
AC189247.2:36464-36485
CTAGTCTCTGCCCTCTCACACTTCCGTCTC36464CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB021P17, complete sequence.
AC189263.2:44010-44031
TCCAGTCTCTCCCCTCTCACGATTCAGTTT44010CTCCACTTCCTCCTTGCTTCATCTACTCTGGTTTTCGTCGGATAGCGGCCGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084N21, complete sequence.
AC232527.1:88302-88323
TCCAGTCTCTCCTCTCTCACGATTCAGTTT88302CTCCACTTCCTCCTTGCTTCATCTACTCTGGTTTTCGTCGGATAGCAGCCGG
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:17154247-17154268
CCTAGCCTCTACCCTCTCAAGCTTCGTCTT17154247CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCGGG
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:53633075-53633096
CTAGTCTATGCCCTCTCACGCTTCCGTCTC53633075CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCAG
Brassica napus genome assembly, chromosome: C03.
HG994367.1:8693825-8693846
CCTAGCCTATACCCTCTCAAGCTTCGTCTT8693825CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGACCGG
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:14535938-14535959
CTAGTCTCTGCCCTCTCACGCTTCTGTCTC14535938CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCGG
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:9252371-9252392
TCCGCCTCCTCTCCTGTTAAGCCATGGCTT9252371CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGCCG
Raphanus sativus genome assembly, chromosome: 2.
OY743208.1:181893-181914
CTAGTCTCTGCCCTTTCACGCTCCGGCCTC181893CTCCACTTCCTCCTTGCTTCATCTCCTCTGTTTATCGTCGGGTTGCGGCCGG
Raphanus sativus genome assembly, chromosome: 4.
OY743210.1:17744162-17744183
TCCGCCTCCTCTCCTGTTAAACCATGGCTT17744162CTCCACTTCCTCCTTGCTTCATCATTTCTGTTTTTTGTTTGGATTACTGCCG
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:9252371-9252392
TCCGCCTCCTCTCCTGTTAAGCCATGGCTT9252371CTCCACTTCCTCCTTGCTTCATCATCTCTGTTTTTCGTTTGGATTACTGCCG
RS2AN75JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW729131.1:492-513
CGGCAGTAATCCAAACAAAAAACAGAAATG492ATGAAGCAAGGAGGAAGTGGAGAAGCCATGGTTTAACAGGAGAGGAGGCGGA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_4497.
FX668195.1:573-594
CGGCAGTAATCCAAACGAAAAACAGAGATG573ATGAAGCAAGGAGGAAGTGGAGAAGCCATGGCTTAACAGGAGAGGAGGCGGA
BOHCQ85TR BOHC Brassica oleracea genomic clone BOHCQ85, genomic survey sequence.
BH477653.1:321-342
CCGGCCGCAACCCGACGATAAACAGAGGAG321ATGAAGCAAGGAGGAAGTGGAGAAGACAAAGCTTGAAAGGGTATAGGCTAGG
BOHCQ85TR BOHC Brassica oleracea genomic clone BOHCQ85, genomic survey sequence.
BH477653.1:562-583
AATTTTTTTTTTTTTTTTTTTGTTCAGTAG562ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTAAATAGTTTCAACCTCTT
BOHAD93TF BOHA Brassica oleracea genomic clone BOHAD93, genomic survey sequence.
BH586543.1:273-294
CCGGTCGCAACCCGACGATAAACAGAGGAG273ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTGAGAGGGTATAGGCTAGG
BOMAR47TR BO_2_3_KB Brassica oleracea genomic clone BOMAR47, genomic survey sequence.
BH660182.1:135-156
CCGGCCGCAACCCGACGATAAACAGAAGAG135ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTGAGAGGGTAGAGGCTAGG
KBrB083F19R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB083F19, genomic survey sequence.
DX073100.1:391-412
CCGGCTGCTATCCGACGAAAACCAGAGTAG391ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGAGGAGAGACTGGA
KBrB104D15F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB104D15, genomic survey sequence.
ED518380.1:408-429
CCGGCTGCTATCCGACGAAAACCAGAGTAG408ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGAGGAGAGACTGGA
KBrB114D15F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB114D15, genomic survey sequence.
ED525261.1:399-420
CCGGCTGCTATCCGACGAAAACCAGAGTAG399ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGAGGAGAGACTGGA
KBrB117C09R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB117C09, genomic survey sequence.
ED527424.1:14-35
AAAACCAGAGTAG14ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGAGGAGAGACTGGA
BOT01-21G20TR BOT01 Brassica oleracea genomic clone BOT01-21G20, genomic survey sequence.
FI682847.1:479-500
CCGGCCGCAACCCGACGATAAACAGAGGAG479ATGAAGCAAGGAGGAAGTGGAGGAGACAGAAGCGTGAGAGGGCAGAGACTAG
Raphanus sativus cultivar WK10039 clone RsH002C8, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC255289.1:24321-24342
CGGCAGTAATCCAAACGAAAAACAGAGATG24321ATGAAGCAAGGAGGAAGTGGAGAAGCCATGGCTTAACAGGAGAGGAGGCGGA
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:6434775-6434796
CCGGCTGCTATCCGACGAAAACCAGAGTAG6434775ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGAGGAGAGACTGGA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:27978063-27978084
CCGGCCGCTATCCGACGAAAACCAGAGTAG27978063ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:50877745-50877766
CCGGCCGCAACCCGACGATAAACAGAGGAG50877745ATGAAGCAAGGAGGAAGTGGAGGAGACAGAAGCGTGAGAGGGCAGAGACTAG
Brassica napus cultivar Xiang5A chromosome 10.
CP123885.1:10447746-10447767
CTGGCCGCAACCCGACGATAAACAGAGGAG10447746ATGAAGCAAGGAGGAAGTGGAGGAGACGGAAGTGTGAGAGGGCAGAGACTAG
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:70595116-70595137
CCGGTCGCAACCCGACGATAAACAGAGGAG70595116ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTGAGAGGGTATAGGCTAGG
Brassica napus genome assembly, chromosome: A01.
HG994355.1:6610275-6610296
CCGGCCGCTATCCGACGAAAACCAGAGTAG6610275ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:27994321-27994342
CCGGCCGCTATCCGACGAAAACCAGAGTAG27994321ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica napus genome assembly, chromosome: A06.
HG994360.1:9211986-9212007
CTGGCCGCAACCCGACGATAAACAGAGGAG9211986ATGAAGCAAGGAGGAAGTGGAGGAGACGGAAGTGTGAGAGGGCAGAGACTAG
Brassica napus genome assembly, chromosome: C08.
HG994372.1:24645245-24645266
CCCGCCGCAACCCGACGATAAACAGAGGAG24645245ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTGAGAGGGTAGAGGCTAGG
Brassica napus genome assembly, chromosome: C09.
HG994373.1:15418383-15418404
CTGGCCGCAACCCGACGATAAACAGAGGAG15418383ATGAAGCAAGGAGGAAGTGGAGGAGACGGAAGCGTGAGAGGGCATAGACTAG
Brassica rapa genome, scaffold: A01.
LR031571.1:6445832-6445853
CCGGCCGCTATCCGACGAAAACCAGAGTAG6445832ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica rapa genome, scaffold: A03.
LR031572.1:27825630-27825651
CCGGCCGCTATCCGACGAAAACCAGAGTAG27825630ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:15360348-15360369
CTGGCCGCAACCCGACGATAAACAGAGGAG15360348ATGAAGCAAGGAGGAAGTGGAGGAGACGGAAGCGTGAGAGGGCATAGACTAG
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:25462242-25462263
CTGGCCGCTATTCGGCGAAAACTAGAGTAG25462242ATGAAGCAAGGAGGAAGTGGAGAAACCGACTCGTGAGAGGGGAGAGACCGGA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:33798354-33798375
CCGGCCGCAACCCGACGATAAACAGAGGAG33798354ATGAAGCAAGGAGGAAGTGGAGAAGACGAAGCTTGAGAGGGTAGAGGCTAGG
Raphanus sativus genome assembly, chromosome: 2.
LR778311.1:35906337-35906358
CGGCAGTAATCCAAACAAAAAACAGAAATG35906337ATGAAGCAAGGAGGAAGTGGAGAAGCCATGGTTTAACAGGAGAGGAGGCGGA
Raphanus sativus genome assembly, chromosome: 3.
LR778312.1:34531334-34531355
CCGGCCGCAACCCGACGATAAACAGAGGAG34531334ATGAAGCAAGGAGGAAGTGGAGGAGGCCGGGAGAGATCTGACCGTTGAATTT
Raphanus sativus genome assembly, chromosome: 5.
LR778314.1:43436241-43436262
CCGGCCGCAACCCGACGATAAACAGAGGAG43436241ATGAAGCAAGGAGGAAGTGGAGGAGGCCGGAGCGTGAAAGGGCAGAGACTAG
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:6470130-6470151
CCGGCCGCTATCCGACGAAAACCAGAGTAG6470130ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:27953642-27953663
CCGGCCGCTATCCGACGAAAACCAGAGTAG27953642ATGAAGCAAGGAGGAAGTGGAGAAACTGAATCGTGAGAGGGGAGAGACTGGA
Raphanus sativus genome assembly, chromosome: 9.
OY743206.1:34531334-34531355
CCGGCCGCAACCCGACGATAAACAGAGGAG34531334ATGAAGCAAGGAGGAAGTGGAGGAGGCCGGGAGAGATCTGACCGTTGAATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCACTTCCTCCTTGCTTCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCACTTCCTCCTTGCTTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.378 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCACTTCCTCCTTGCTTCAT&k=0&no_gap=0&offset=0&limit=50
0.684 | 0.306 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAAGCAAGGAGGAAGTGGAG&k=0&no_gap=0&offset=0&limit=30
0.705 | 0.022 | cgi_end;

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