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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-19 15:09:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRCS01_04dg09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04dg09, mRNA sequence.
CB292716.1:249-268
TGGCTCACGGCCCAGACGGTTGGCACACAG249CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS01_06dh04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06dh04, mRNA sequence.
CB293954.1:248-267
TGGCTCACGGCCCAGACAGTTGGCACACAG248CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS01_06dh09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06dh09, mRNA sequence.
CB293962.1:235-254
TGGCTCACGGCCCAGACAGTTGGCACACAG235CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP_119000-361 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G06 5', mRNA sequence.
CF503874.1:280-299
TGGCTCACGGCCCAGACAGTTGGCACACAG280CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP_121000-326 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-36_G08 5', mRNA sequence.
CF505831.1:200-219
TGGCTCACGGCCCAGACGGTTGGCACACAG200CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP_122000-825 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-56_C08 5', mRNA sequence.
CF507324.1:285-304
TGGCTCACGGCCCAGACGGGTGGCACACAG285CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP_124000-435 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-72_E03 5', mRNA sequence.
CF508932.1:285-304
TGGCTCACGGCCCAGACGGTTGGCACACAG285CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCR01_05N22_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa05N22, mRNA sequence.
CF831150.1:282-301
TGGCTCACGGCCCAGACAGTTGGCACACAG282CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS03_02C06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C06, mRNA sequence.
CF835928.1:285-304
TGGCTCACGGCCCAGACAGTTGGCACACAG285CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
CGF1004553_B02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_B02 5', mRNA sequence.
CK935665.1:281-300
TGGCTCACGGCCCAGACAGTTGGCACACAG281CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS04_0001A06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A06, mRNA sequence.
CN181482.1:265-284
TGGCTCACGGCCCAGACAGTTGGCACACAG265CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS04_0005D13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005D13, mRNA sequence.
CN184250.1:121-140
TGGCTCACGGCCCAGACGGTTGGCACACAG121CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS05_0003O17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003O17, mRNA sequence.
CN187088.1:281-300
TGGCTCACGGCCCAGACGGTTGGCACACAG281CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS05_0006M02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M02, mRNA sequence.
CN188775.1:253-272
TGGCTCACGGCCCAGACGGTTGGCACACAG253CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS05_0006P20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P20, mRNA sequence.
CN188895.1:250-269
TGGCTCACGGCCCAGACAGTTGGCACACAG250CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS06_0002E15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E15, mRNA sequence.
CN189701.1:256-275
TGGCTCACGGCCCAGACAGTTGGCACACAG256CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS06_0006N18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N18, mRNA sequence.
CN192418.1:285-304
TGGCTCACGGCCCAGACGGTTGGCACACAG285CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_0005L14_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0005L14, mRNA sequence.
CV715416.1:276-295
TGGCTCACGGCCCAGACAGTTGGCACACAG276CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_0007P17_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0007P17, mRNA sequence.
CV716857.1:269-288
TGGCTCACGGCCCAGACGGTTGGCACACAG269CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_0011D11_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011D11, mRNA sequence.
CV718929.1:135-154
TGGCTCACGGCCCAGACAGTTGGCACACAG135CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_0011L11_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011L11, mRNA sequence.
CV719271.1:159-178
TGGCTCACGGCCCAGACAGTTGGCACACAG159CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_0011N09_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011N09, mRNA sequence.
CV719358.1:135-154
TGGCTCACGGCCCAGACAGTTGGCACACAG135CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS09_18E05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-18E05-J9-1-4.g, mRNA sequence.
CX048058.1:268-287
TGGCTCACGGCCCAGACAGTTGGCACACAG268CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS09_41F01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-41F01-K2-1-7.b, mRNA sequence.
CX051711.1:276-295
TGGCTCACGGCCCAGACAGTTGGCACACAG276CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS09_46B09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-46B09-D17-1-7.b, mRNA sequence.
CX052466.1:250-269
TGGCTCACGGCCCAGACAGTTGGCACACAG250CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_19A02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-19A02-B3-1-5.g, mRNA sequence.
CX070793.1:130-149
TGGCTCACGGCCCAGACGGTTGGCACACAG130CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS08_26F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-26F02-K4-1-4.g, mRNA sequence.
CX072193.1:263-282
TGGCTCACGGCCCAGACAGTTGGCACACAG263CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C01018E09SK Veg1 Citrus clementina cDNA clone C01018E09, mRNA sequence.
CX288266.1:258-277
TGGCTCACGGCCCAGACAGTTGGCACACAG258CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C02024E09SK IF1 Citrus clementina cDNA clone C02024E09, mRNA sequence.
CX290471.1:213-232
TGGCTCACGGCCCAGACAGTTGGCACACAG213CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C03010B11SK OF2 Citrus clementina cDNA clone C03010B11, mRNA sequence.
CX291521.1:210-229
TGGCTCACGGCCCAGACGGTTGGCACACAG210CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C04016D03SK FlavFr1 Citrus clementina cDNA clone C04016D03, mRNA sequence.
CX292495.1:278-297
TGGCTCACGGCCCAAACAGTTGGCACACAG278CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C06009C02SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06009C02, mRNA sequence.
CX298159.1:284-303
TGGCTCACGGCCCAGACAGTTGGCACACAG284CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C06023C12SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06023C12, mRNA sequence.
CX299517.1:223-242
TGGCTCACGGCCCAGACAGTTGGCACACAG223CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C07004F04SK SaltLeaf1 Citrus clementina cDNA clone C07004F04, mRNA sequence.
CX299974.1:287-306
TGGCTCACGGCCCAGACAGTTGGCACACAG287CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
C08015E11SK PhyRootSw1 Citrus sinensis cDNA clone C08015E11, mRNA sequence.
CX301959.1:121-140
TGGCTCACGGCCCAGACAGTTGGCACACAG121CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCP01_037_H04_T3 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_037_T3_H04, mRNA sequence.
CX668472.1:253-272
TGGCTCACGGCCCAGACGGTTGGCACACAG253CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCP01_040_D01_T3 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_040_T3_D01, mRNA sequence.
CX668889.1:253-272
TGGCTCACGGCCCAGACGGTTGGCACACAG253CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: ANT0459, 5'-end sequence, expressed in anther.
DC883755.1:269-288
TGGCTCACAGCCCAGAAGGTTGGCACACAG269CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: ANT2_0054, 5'-end sequence, expressed in anther.
DC884069.1:301-320
TGGCTCACAGCCCAGAAGGTTGGCACACAG301CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: BFC3E96, 5'-end sequence, expressed in flavedo.
DC885754.1:250-269
TGGCTCACAGCCCAGAAGGTTGGCACACAG250CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: BFC5D46, 5'-end sequence, expressed in flavedo.
DC886504.1:43-62
TGGCTCACAGCCCAGAAGGTTGGCACACAG43CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: BFC5D70, 5'-end sequence, expressed in flavedo.
DC886519.1:378-397
TGGCTCACGGCCCAGACAGTTGGCACACAG378CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: FBI1139, 5'-end sequence, expressed in floral bud.
DC889174.1:156-175
TGGCTCACGGCCCAGACAGTTGGCACACAG156CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
Citrus unshiu mRNA, clone: STG0836, 5'-end sequence, expressed in style.
DC898528.1:265-284
TGGCTCACGGCCCAGACAGTTGGCACACAG265CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCS11_04G08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0004G08, mRNA sequence.
DN619776.1:269-288
TGGCTCACGGCCCAGACAGTTGGCACACAG269CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCA01_02H15_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0002H15, mRNA sequence.
DN622703.1:250-269
TGGCTCACGGCCCAGACAGTTGGCACACAG250CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
UCRCA01_03K13_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0003K13, mRNA sequence.
DN623519.1:137-156
TGGCTCACGGCCCAGACAGTTGGCACACAG137CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP/ARO_13349 Star Ruby grapefruit temperature-conditioned flavedo cDNA Citrus x paradisi cDNA clone Cond-37_H05 5', mRNA sequence.
DN798481.1:125-144
TGGCTCACGGCCCAGACGGTTGGCACACAG125CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP/ARO_13878 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-06_F01 5', mRNA sequence.
DN958048.1:81-100
TGGCTCACGGCCCAGACGGTTGGCACACAG81CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG
USDA-FP/ARO_13902 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-06_H03 5', mRNA sequence.
DN958072.1:113-132
TGGCTCACGGCCCAGACGGTTGGCACACAG113CTCGAAAGCTACCACAAGGCTTCATCACTAGCATTTGCCATTCAAGATGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCGAAAGCTACCACAAGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCGAAAGCTACCACAAGGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.018 | 2.009 | search_plus_done; http://172.18.8.135:50400/match?q=CTCGAAAGCTACCACAAGGC&k=0&no_gap=0&offset=0&limit=50
2.069 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTTGTGGTAGCTTTCGAG&k=0&no_gap=0&offset=0&limit=0
2.069 | 0.000 | cgi_end;

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