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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-19 23:21:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus cDNA, clone: LjFL3-042-DA03, 5'-end sequence.
FS332207.1:111-130
TTGATTCATCATCAACACATTCAGAAAACC111CTGGCACCAAACATTCTCTCACGCATCCATTTTCTTCCATGGCAACCCCT
Lotus japonicus cDNA, clone: LjFL3-059-DC01, 5'-end sequence.
FS337678.1:93-112
TTGATTCATCATCAACACATTCAGAAAACC93CTGGCACCAAACATTCTCTCACGCATCCATTTTCTTCCATGGCAACCCCT
Lotus japonicus cDNA, clone: LjFL3-042-DA03, HTC.
AK339093.1:111-130
TTGATTCATCATCAACACATTCAGAAAACC111CTGGCACCAAACATTCTCTCACGCATCCATTTTCTTCCATGGCAACCCCT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB19C13, BM1800a.
AP010333.1:45937-45956
TTGATTCATCATCAACACATTCAGAAAACC45937CTGGCACCAAACATTCTCTCACGCATCCATTTTCTTCCATGGCAACCCCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:78659102-78659121
AGGGGTTGCCATGGAAGAAAATGGATGCGT78659102GAGAGAATGTTTGGTGCCAGGGTTTTCTGAATGTGTTGATGATGAATCAA
Elophila nymphaeata genome assembly, chromosome: 28.
OY039094.1:11588839-11588858
TATTTGTTCTATGATCTTGTCGTAAACTAT11588839GAGAGAATGTTTGGTGCCAGTCAACCGCATATCCTGCTATACGGAACTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGGCACCAAACATTCTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGCACCAAACATTCTCTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.304 | 0.295 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGCACCAAACATTCTCTC&k=0&no_gap=0&offset=0&limit=50
0.332 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGAATGTTTGGTGCCAG&k=0&no_gap=0&offset=0&limit=46
0.334 | 0.002 | cgi_end;

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