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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-06 04:12:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

UCRCS01_02ab10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ab10, mRNA sequence.
CB290887.1:139-158
GAACTCTCCTTTCTTAGAGAGAGGAATGGT139GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS01_05db04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05db04, mRNA sequence.
CB293232.1:267-286
GAACTCTCCTTTCTTAAAGAGAGGAATGGT267GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCR01_06G23_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa06G23, mRNA sequence.
CF831526.1:168-187
GAACTCTCCTTTCTTAGAGAGAGGAATGGT168GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS03_02E12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E12, mRNA sequence.
CF836014.1:164-183
GAACTCTCCTTTCTTAGAGAGAGGAATGGT164GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS03_04I12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04I12, mRNA sequence.
CF837353.1:404-423
GAACTCTCCTTTCTTAGAGAGAGGAATGGT404GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS06_0004O20_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004O20, mRNA sequence.
CN191298.1:142-161
GAACTCTCCTTTCTTAGAGAGAGGAATGGT142GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS09_46D12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-46D12-H23-1-7.b, mRNA sequence.
CX052518.1:169-188
GAACTCTCCTTTCTTAGAGAGAGGAATGGT169GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS08_12B09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12B09-D18-1-4.g, mRNA sequence.
CX069684.1:159-178
GAACTCTCCTTTCTTAGAGAGAGGAATGGT159GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS08_12H02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12H02-P4-1-5.b, mRNA sequence.
CX069800.1:156-175
GAACTCTCCTTTCTTAGAGAGAGGAATGGT156GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS08_23A12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-23A12-B23-1-5.b, mRNA sequence.
CX071649.1:150-169
GAACTCTCCTTTCTTAGAGAGAGGAATGGT150GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS08_24B09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-24B09-D18-1-5.b, mRNA sequence.
CX071813.1:150-169
GAACTCTCCTTTCTTAGAGAGAGGAATGGT150GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
C21007G05Rv AbsLeaSub1 Citrus clementina cDNA clone C21007G05, mRNA sequence.
CX309404.1:410-429
GAACTCTCCTTTCTTAGAGAGAGGAATGGT410GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCCCCG
UCRCS10_11F05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F05-L9-6.b, mRNA sequence.
CX671531.1:159-178
GAACTCTCCTTTCTTAGAGAGAGGAATGGT159GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
UCRCS11_06J23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J23, mRNA sequence.
DN621370.1:486-505
GAACTCTCCTTTCTTAGAGAGAGGAATGGT486GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGCTCCACCTCAT
CVSOVPOAN178 Library from post anthesis stages of ovules of polyembryonic Citrus sinensis Citrus sinensis cDNA, mRNA sequence.
HO046794.1:186-205
GAACTCTCCTTTCTTAGAGAGAGGAATGGT186GAAGTTGCCGATGATAGGGAGATCAATGGTGAGACCCAGTTCCACCTCAT
Acleris literana genome assembly, chromosome: 16.
OX335684.1:6417589-6417608
CTTTGTTACGATCGAGATTGATGTTTTTTC6417589GAAGTTGCCGATGATAGGGAAGTGTGGTGGAATCAAAGGAATAAAATTAA
USDA-FP_00657 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00657 5', mRNA sequence.
BQ623566.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS01_05db04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05db04, mRNA sequence.
CB293233.1:489-508
ATGAGGTGGAGCTGGGTCTCACCATTGATC489TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_122000-660 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-54_E03 5', mRNA sequence.
CF507160.1:366-385
ATGAGGTGGAGCTGGGTCTCACCATTGATC366TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_122000-968 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-57_H03 5', mRNA sequence.
CF507467.1:170-189
ATGAGGTGGAGCTGGGTCTCACCATTGATC170TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_123000-287 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-60_E07 5', mRNA sequence.
CF507786.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_124000-214 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-70_A05 5', mRNA sequence.
CF508711.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCR01_01N11_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01N11, mRNA sequence.
CF828604.1:318-337
ATGAGGTGGAGCTGGGTCTCACCATTGATC318TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_02E12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E12, mRNA sequence.
CF836015.1:479-498
ATGAGGTGGAGCTGGGTCTCACCATTGATC479TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_04I12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04I12, mRNA sequence.
CF837354.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06G23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G23, mRNA sequence.
CF838390.1:488-507
ATGAGGTGGAGCTGGGTCTCACCATTGATC488TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06K18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K18, mRNA sequence.
CF838468.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06G23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G23, mRNA sequence.
CF838734.1:488-507
ATGAGGTGGAGCTGGGTCTCACCATTGATC488TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06K18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K18, mRNA sequence.
CF838811.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004258_E01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_E01 5', mRNA sequence.
CK934487.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004513_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E06 5', mRNA sequence.
CK937152.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004439_F05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F05 5', mRNA sequence.
CK938681.1:27-46
GGGGGAGCTGGGTCTCACCATTGATC27TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS06_0004M18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004M18, mRNA sequence.
CN191227.1:466-485
ATGAGGTGGAGCTGGGTCTCACCATTGATC466TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS06_0004N19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004N19, mRNA sequence.
CN191265.1:482-501
ATGAGGTGGAGCTGGGTCTCACCATTGATC482TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS07_18E07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-18E07-J14-1-4.g, mRNA sequence.
CX044591.1:471-490
ATGAGGTGGAGCTGGGTCTCACCATTGATC471TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS09_46D12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-46D12-H23-1-6.g, mRNA sequence.
CX052517.1:475-494
ATGAGGTGGAGCTGGGTCTCACCATTGATC475TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_12B09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12B09-D18-1-5.b, mRNA sequence.
CX069683.1:476-495
ATGAGGTGGAGCTGGGTCTCACCATTGATC476TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_12H02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12H02-P4-1-4.g, mRNA sequence.
CX069801.1:470-489
ATGAGGTGGAGCTGGGTCTCACCATTGATC470TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_23A12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-23A12-B23-1-4.g, mRNA sequence.
CX071650.1:466-485
ATGAGGTGGAGCTGGGTCTCACCATTGATC466TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05142E10SK FerrChloL1 Citrus clementina cDNA clone C05142E10, mRNA sequence.
CX296529.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05807G11SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05807G11, mRNA sequence.
CX297026.1:468-487
ATGAGGTGGAGCTGGGTCTCACCATTGATC468TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05808D08SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05808D08, mRNA sequence.
CX297079.1:80-99
ATGAGGTGGAGCTGGGTCTCACCATTGATC80TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05810A11SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05810A11, mRNA sequence.
CX297228.1:236-255
ATGAGGTGGAGCTGGGTCTCACCATTGATC236TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05810C05SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05810C05, mRNA sequence.
CX297242.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C06023B07SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06023B07, mRNA sequence.
CX299500.1:153-172
ATGAGGTGGAGCTGGGTCTCACCATTGATC153TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS10_11F05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F05-L9-5.g, mRNA sequence.
CX671532.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus unshiu mRNA, clone: ANT0756, 5'-end sequence, expressed in anther.
DC883924.1:503-522
ATGAGGTGGAGCTGGGTCTCACCATTGATC503TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus unshiu mRNA, clone: STG1045, 5'-end sequence, expressed in style.
DC898634.1:503-522
ATGAGGTGGAGCTGGGTCTCACCATTGATC503TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS11_06J23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J23, mRNA sequence.
DN621371.1:452-471
ATGAGGTGGAGCTGGGTCTCACCATTGATC452TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTN
CSAH-PNP1246A24 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246A24 5', mRNA sequence.
DR403717.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:7089248-7089267
ATGAGGTGGAGCTGGGTCTCACCATTGATC7089248TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGTTGCCGATGATAGGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGTTGCCGATGATAGGGA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.580 | 0.572 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGTTGCCGATGATAGGGA&k=0&no_gap=0&offset=0&limit=50
1.566 | 0.986 | search_minus_done; http://172.18.8.135:50400/match?q=TCCCTATCATCGGCAACTTC&k=0&no_gap=0&offset=0&limit=34
1.588 | 0.022 | cgi_end;

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