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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-18 04:24:09, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus mRNA, clone: MR041h03_r, 5' end sequence.
DC599261.1:530-549
CCAACTCCTCCTTCATGTCCTCCATCACCG530GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGC
Lotus japonicus cDNA, clone: LjFL3-018-AC05, 5'-end sequence.
FS324099.1:548-567
CCAACTCCTCCTTCATGTCCTCCATCACCG548GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus cDNA, clone: LjFL1-029-BD10, HTC.
AK336837.1:533-552
CCAACTCCTCCTTCATGTCCTCCATCACCG533GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT37C07, TM0664.
AP007499.2:118618-118637
CCAACTCCTCCTTCATGTCCTCCATCACCG118618GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:68368305-68368324
CCAACTCCTCCTTCATGTCCTCCATCACCG68368305GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Ampedus sanguinolentus genome assembly, chromosome: 8.
OZ174271.1:97036533-97036552
GGATACTGGCAAGTAGGACTGAAAGACTGC97036533GAGAAGGCAGCGTTTCCAACTGGACAAGGCCTTTGGGAGTTCACTGTTTT
Lissotriton vulgaris genome assembly, chromosome: 3_1.
OZ183353.1:872937103-872937122
AACGGACACCCAATTAGGCGGAGAGCAGGT872937103GAGAAGGCAGCGTTTCCAACTCAGGCAGCAGAACAACGCAGCGGCTAGGC
Lissotriton vulgaris genome assembly, chromosome: 7.
OZ183359.1:507465402-507465421
AACGGACACCCAATTAAGCGGAGAGCAGGT507465402GAGAAGGCAGCGTTTCCAACTCAGGCAGCAGAACGACGCAGCGGCTAGGC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT05D12, TM0303.
AP006417.1:74701-74720
GGCGGCGACGATGGCGAGGCCGATCTTGCC74701GTTGGAAACGCTGCCTTCTCCGGTGATGGAGGACATGAAGGAGGAGTTGG
Lissotriton vulgaris genome assembly, chromosome: 8.
OZ183360.1:29486278-29486297
GCCTAGCCGCTGCGTCCTTCTGCTGCCTGA29486278GTTGGAAACGCTGCCTTCTCACCTGCTCTCCGCTTAATTTGGTGACCTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGAAGGCAGCGTTTCCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAAGGCAGCGTTTCCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.283 | 0.274 | search_plus_done; http://172.18.8.135:50800/match?q=GAGAAGGCAGCGTTTCCAAC&k=0&no_gap=0&offset=0&limit=50
0.377 | 0.094 | search_minus_done; http://172.18.8.135:50800/match?q=GTTGGAAACGCTGCCTTCTC&k=0&no_gap=0&offset=0&limit=42
0.378 | 0.001 | cgi_end;

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