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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-15 15:23:25, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Capnocytophaga sputigena strain KC1668 chromosome, complete genome.
CP022385.1:1244199-1244218
AAGCCTTGTTGAATTTGCAAACAGAACTGG1244199GCAACGACACTTTTGAGCAAACCAAACAAAAGGCTCTCAATCTTTGGGAA
Sequence 72270 from Patent EP2761003.
JC686489.1:241-260
GAAATTGATTTCAACGTGTATCTTTTCGTC241TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
UDP96-003 AC- and AG-enriched peach leaf genomic libraries Prunus persica STS genomic clone peach-ac 4, sequence tagged site.
BV079690.1:29-48
AATTGATTTCAACGTGTATCTTTTCGTC29TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
Prunus dulcis DNA, pseudomolecule Pd04.
AP019300.1:8904270-8904289
GAAATTGATTTCAACGTGTATCTTTTCGTC8904270TTGCTCAAAAGTGTCGTTGCACTACTCTCTCTCTCTCTCTCTCTCTCTCT
Prunus speciosa IZO01 DNA, chromosome 4, sequence.
AP029592.1:11052091-11052110
GAAATTGATTTCAACTTGTATCTTTTCGTC11052091TTGCTCAAAAGTGTCGTTGCACCACTCTCTCTCTCTCTCTCTCTCTCTCA
Prunus speciosa IZO01 DNA, chromosome 4.
AP038366.1:10853192-10853211
GAAATTGATTTCAACTTGTATCTTTTCGTC10853192TTGCTCAAAAGTGTCGTTGCACCACTCTCTCTCTCTCTCTCTCTCTCTCA
Prunus dulcis genome assembly, chromosome: 4.
OZ022200.1:10128492-10128511
GAAATTGATTTCAACGTGTATCTTTTCGTC10128492TTGCTCAAAAGTGTCGTTGCACTACTCTCTCTCTCTCTCTCTCTCTCTCT
Prunus dulcis genome assembly, chromosome: 4.
OZ022209.1:10295117-10295136
GAAATTGATTTCAACGTGTATCTTTTCGTC10295117TTGCTCAAAAGTGTCGTTGCACTACTCTCTCTCTCTCTCTCTCTCTCTCT
Prunus armeniaca genome assembly, chromosome: 4.
OZ046363.2:10096124-10096143
GAAATTGATTTCAACCTGTCTCTTTTCGTC10096124TTGCTCAAAAGTGTCGTTGCACCACTCTCTCTCTCTCTCTCTCTCTCTCA
Prunus padus genome assembly, chromosome: 12.
OZ060522.1:9018252-9018271
GAAATTGATTTCAACGTGTATCCTTTCGTC9018252TTGCTCAAAAGTGTCGTTGCACCACTCTCTCTCTCTCTCTCTCTCTCTCT
Prunus armeniaca genome assembly, chromosome: 4.
OZ177840.1:9676824-9676843
GAAATTGATTTCAACCTGTCTCTTTTCGTC9676824TTGCTCAAAAGTGTCGTTGCACCACTCTCTCTCTCTCTCTCTCTCTCTCT
Capnocytophaga sputigena strain D1179 chromosome, complete genome.
CP022379.1:2255358-2255377
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2255358TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain H4486 chromosome, complete genome.
CP022383.1:2454920-2454939
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2454920TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain NCTC11097 genome assembly, chromosome: 1.
LR134489.1:2335540-2335559
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2335540TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Pterapherapteryx sexalata genome assembly, chromosome: 11.
OZ123539.1:4866804-4866823
TGAGATTGGTGGTCGCATGGTTATATTTTA4866804TTGCTCAAAAGTGTCGTTGCGCTCGCCGCTTGAATCGGAGCGGTGCGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAACGACACTTTTGAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACGACACTTTTGAGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.372 | 0.363 | search_plus_done; http://172.18.8.135:50800/match?q=GCAACGACACTTTTGAGCAA&k=0&no_gap=0&offset=0&limit=50
0.555 | 0.183 | search_minus_done; http://172.18.8.135:50800/match?q=TTGCTCAAAAGTGTCGTTGC&k=0&no_gap=0&offset=0&limit=49
0.564 | 0.010 | cgi_end;

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